Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03594 ATGTCACTATCTATAATAACCCTCTCTCTCCCTAACACCATATGCATCATCATCATTAACCATCACTTTACCATTGGTTCTGTGAGTGTTTGCACAATGGCCTCAGAAAATGAAGAAAAAGTAGAGCTTGGTTTCAATGCAGTTCCTGACACAAAGCCAAAGAAGGATTGGGTCCTTTTGTCCCTAAGGGTGGTTGCATTTTTGGCCACTTCAGCTGCAACACTTGTGATGGCATTCAACAAACAGACCAAAAATTTTATAGTTGCCACCACTGGTAACACCCCAATAACAGCTACTATTAGTGCAAAGTTTAATCAAACCCCAGCTTTTGTGTTCTTTGTGATAGCCAATGGAAATGCCAGTCTCCATAACTTGGTGATGATAACATTGGATATATTAGGATCCCAATATGATTACAAAGGACTCCGGCTTGCATTGATTGCAATATTAGACATGATGACTATGGCTCTGGCTTCAGCTGGGGATGGTGCAGCAACATTCATGTCAGAATTGGGAAGGAATGGTAATTCACATGCAAGGTGGAATAAGATCTGTGACAAATTTGAAACCTATTGCAACCGAGGTGGTGCTGCCCTCATTGCTTCTTTCATTGGCTTCATTCTCCTCCTTATTATTACAGTGATGTCCATCACCAAGCTGCTCAAACCAAATCGCATTAACCATGCTCCTTGA 693 0.4141 MSLSIITLSLPNTICIIIINHHFTIGSVSVCTMASENEEKVELGFNAVPDTKPKKDWVLLSLRVVAFLATSAATLVMAFNKQTKNFIVATTGNTPITATISAKFNQTPAFVFFVIANGNASLHNLVMITLDILGSQYDYKGLRLALIAILDMMTMALASAGDGAATFMSELGRNGNSHARWNKICDKFETYCNRGGAALIASFIGFILLLIITVMSITKLLKPNRINHAP. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03594 230 Pfam Casparian strip membrane protein domain 54 208 IPR006702 -
Seca6g03594 230 NCBIfam plant integral membrane protein TIGR01569 60 219 IPR006459 -
Seca6g03594 230 PANTHER CASP-LIKE PROTEIN 1U1 55 219 IPR044173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03594 Seca-Chr6 103256845 103258240 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03594 - - gmx:100792043 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03594 6 103256845 103258240 Seca6g03594 6 103256845 103258240 ECH