Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03586 ATGGGCTGTGTTTTGTCAAGTTTTGATGAGGATGAGAGGGTTGGCATCTGTAAGGAAAGGAAGAGGGTAATCAAACAGTTGGTGGGTGTTAGAAAGGAGTTTTCTGATTCCCTATTAGCTTATTTGAAAGCATTGAGGAACACTGGTGCCACCCTTAGGCAATTCACGGAGTCTGATACATTAGAATTTGAAATTGCCTCTAATGGCCTGGCTGAGCCACCTTCTCCACAACCCCGTCTGCTACCACCACCACTGCCTCCTTTTCTTGCTGACAAGACTATAACCCAAGTTACCCATGAGGATATACTAGAGAATGATGAAAACTATGTTCCTACACTACAAATTGACACAAGTATGAACTCATCATGGCTATTTCAACCTGCACTTAAAAAAGAAATAGTAGAATCAGTGGATGAGGAGAATTGGGAAGAAACCAAAACAGATTTTGAGGATGAAGACCCAGACTCAGAAGCTGCTGTGAGTGTTGGAAAATCACGTAGTGGGAAGCAACAGTCCATAGAACCAGTTGATGATAATTCATCTGCAATTAGTTTGTATAGGAAAGACACTACAGCTATGCCCATGGTGGTTGGTAGAAGTGGGAAAACATTGGAACGTATAGTTAAAGAGTTAGATGATCATTTCCTGAAAGCATCAGCATGTATAAAGGAAGTTGCTGTTCTTATTGATATCAGTCGAGGGGATACTCTTCTGCGGCAGAATTCTGGGCATTACAATAGTAAGAGAGGCAATTCTGCTAAGGTCTTCAGTGTACTGTGGAGTAGGCATTCTAAGTCACCTCAGTTCACCAAAGATGCTGCTGAGTTTTCTGGTCCTAATGAACCATGCAGGCCTGGAGCTCATTGTGCCACACTTAAAAAATTATACACTGCAGAGAAGAAACTTTTCAAGGCATTAAAGGAAGAGGGAGTAGCCAAATTGGAGTTTGAGAGGAAGTCCTCGTTATTGCATAAACAAGAGGATGAGAACCTTGACTTGGTCAAAATTGACAAAACTCGATCATGTGTTGAGAAGTTGGAGTCTAATATAATAAGCCTACAGCAGTCAATCGGTGAAACAACTTCATCAATTTTGGAACTTATAGATGAGGAGCTTACACCCCAGCTGGTTGCATTGACTGCAGGGCTGATGCAAATGTGGAGGACAATGCATGAGTGCCATCATGCCCAGGCACACATCTCCCAGCAGTTGAGTAACCTCAATGATAATCATAACACAATATTCAATTCTGAATACCATCACCAGGCTACAATTCAGTTTGAGACTGAGGCCTCTTATTGGTATAATAGCTTTTGCAAACTCAAAAAATCTCAACGAGAGTATGTAAGGACCCTCGGTAGATGGATTGAGCTTACCAACTGCCTCAGGGATGGTCATGATGAATGTAGTGATCACTCCTCCATTCATACCATTTGTAAAAAGTGGGAGCTTGGGCTTGACGGATTACCTTACGAGGTACTTTTTGCTCAAAATTTGATGTCATGA 1506 0.4183 MGCVLSSFDEDERVGICKERKRVIKQLVGVRKEFSDSLLAYLKALRNTGATLRQFTESDTLEFEIASNGLAEPPSPQPRLLPPPLPPFLADKTITQVTHEDILENDENYVPTLQIDTSMNSSWLFQPALKKEIVESVDEENWEETKTDFEDEDPDSEAAVSVGKSRSGKQQSIEPVDDNSSAISLYRKDTTAMPMVVGRSGKTLERIVKELDDHFLKASACIKEVAVLIDISRGDTLLRQNSGHYNSKRGNSAKVFSVLWSRHSKSPQFTKDAAEFSGPNEPCRPGAHCATLKKLYTAEKKLFKALKEEGVAKLEFERKSSLLHKQEDENLDLVKIDKTRSCVEKLESNIISLQQSIGETTSSILELIDEELTPQLVALTAGLMQMWRTMHECHHAQAHISQQLSNLNDNHNTIFNSEYHHQATIQFETEASYWYNSFCKLKKSQREYVRTLGRWIELTNCLRDGHDECSDHSSIHTICKKWELGLDGLPYEVLFAQNLMS. 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03586 501 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Seca6g03586 501 MobiDBLite consensus disorder prediction 137 181 - -
Seca6g03586 501 MobiDBLite consensus disorder prediction 138 156 - -
Seca6g03586 501 Pfam Protein of unknown function (DUF632) 205 493 IPR006867 -
Seca6g03586 501 PANTHER UNCHARACTERIZED 1 492 - -
Seca6g03586 501 MobiDBLite consensus disorder prediction 163 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03586 Seca-Chr6 103115637 103120542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03586 1 76 Acyl Lipid Metabolism Gene Families AT2G27090 31.169 3.72e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03586 - - lja:Lj0g3v0090629.1 731.865