Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03134 ATGGCCAGCACCAGTGGCACAAAGGGTCCTTATGAGATGGCCCGTCAGCCATCAAAGAGGATGATAAGGGCACCTACCAGGACTGTGGAGTTGCCAAATGAGGAGAATATGATGGACAGTGAAATTGTACCTTCCTCCCTTGCTGTCCTTGTGCCAATTCTCAGAGCAGCCCTTGAGATTGAGGAGGAGAATCCCAGAGTTGCCTATCTTTGTCGCTTTCATGCATTTGAGAAGGCTCATACAATGGATCCAACATCAAGTGGGCGTGGTGTTCGTCAGTTCAAGACTTACCTGTTGCACAAACTCGAAAGGGAAGGGGAGCTTACAGAAAAACTTGCTAAAAGAAGTGATGCTAGGGAGCTGCAGACCTATTACCAAACATTCTATGAGAAGAGAATCCGGGATGGTGAATTTACACTAAAACCGGAGGATATAATTAAGAATGTTCAGATTGCCACTGTGTTGTATGAAGTGCTGAAGACTATGGTAGCTCCACAAAGTATTGAGGAGAAGACAAAAAGATATGCTGAAGATGTAGAGAAAAAGAGAGGACAATATGAGCACTATAATATCCTTCCATTATATGCTGTTGGTGTTAAGCCAGCAATCATGGAACTTCCTGAGATCAAAGCAGCAATTGCTGCTTTATGTAAGGTGGATAATCTTCCAATGCCCATCTTTCGTTCACGACCTGGTGCCTCTAATGATGATTCTACAATGCCTATGGAGAGGGTTAAAAATGTGAATGATATACTTGATTGGATTTCCTCAATTTTTGGGTTTCAGAAAGGAAATGTGGCAAATCAAAGGGAGCACCTTATCTTATTACTTGCCAACATAGATATAAGGAATAGGGCTGAATCTTATGAGCTCCGTGAAGAAACTGTAGAAAAGTTGATGGCAACAAATTTCAAAAATTATGAGTCATGGTGTCATTACGTTCGTTGTAAATCCCATCTTAGGTTTCCAGATGAACTTGACAGACAACAGTTACAACTGATTTACATTGCACTTTATCTTTTAATATGGGGAGAAGCTTCAAATATTCGCTTTATGCCTGAATGCCTTTGCTATATTTTCCATCATATGTGCGATGATGTCTTTGGGATTTTATATAGCAATGCCCATCATGTGAGTGGGGACGCGTACCAAATAGTAGCACGTGATGATGAATATTTTCTCAGGGAAGTTATAACACCTATATATGAAGTTTTAATGAAGGAAGCAAAGAGAGGCAACAAAGGCAAGGCAAGTCATTCCAATTGGAGAAACTATGATGATCTTAATGAATACTTTTGGTCTGACAAATGTTTTAAGTTAGGCTGGCCAATGAATCAAAATGCAGATTTTTTTAGGCGTTCAGATGAGATACAAACAACAAATCAGGGCACTAGCCAAGCCAGCACTGGAGCTGGTAAGAAGAAGCCCAAAACAAATTTTGTTGAAGTTCGTACATTTTTGCATCTGTATAGGAGTTTTGATCGAATGTGGATATTCTTTATATTGGCTTTACAGGCAATGATTATTATTGCATGGAGTTCCTTGGGACCTATTGGAGTTCTTTCTGATGCAGATGTCTTCAGAAATGTTATGACAATATTTATTACATATGCTTTTCTCAATTTTCTTCAAGTAACTGTTGATATTATTCTTATCTGGAATGCATTGGGGAATATGAAATTCACTCAGTTGTTGCGGTATTTTTTGAAATTCGTGGTAGCAGCTGTTTGGGTTGTTGTTTTGCCAGTCAGTTATTCTAGTTCTCTCCAGAACCCCACAGGGCTTATAAAATTTGTCACCAGTTGGGCTGGGGATTGGGGGAGCCAGTCACTTTATACCTATGTTGTTGCATTATATATGTTACCAAACATAGTGGCTGCAATACTGTTTTTCCTTCCACCTCTGCGGAGAACAATGGAGCGCTCAAATATGCGAATCATTACCCTTTTAATGTGGTGGGCGCAGCCAAAATTGTATGTAGGCAGGGGCATGCATGAGAACATATTCTCACTACTGAAGTACACCCTCTTCTGGATCATGCTGTTAATTAGCAAGCTAGCATTCAGTTACTATGTGGAGATATTGCCCCTTGTTGGACCTACAAAATTAATCATGGGAATGCACATAGATAACTACCAGTGGCATCAATTCTTTCCAGAAAATGAGACTCACAATATATGTGTTGTCATTGCAATATGGGCTCCAATTATCCTGGTTTATTTTATGGATACTCAAATATGGTATTCCATTTATGCCACTTTATTTGGTGGGATTATTGGAGCCTTCAGCCATTTGGGTGAGATAAGGACACTTGGAATGCTCCGCTCCAGATTTCAATCTGTACCACTAGCTTTCAGTCAGCGCTTTTGGACTGGAAGAAACAGAAAGAATATACAGGAGGATTCGGATGATTCATATGAACGGTATAATATTGCATACTTCTCTCAGGTTTGGAATGAGTTTATAAATTCTATGAGAGAGGAAGACCTCATCAGTAACAGGGATAGAGATTTGCTTCTTGTTCCATACAGTTCAATTGATGTTTCTGTCATTCAGTGGCCTCCATTCTTGCTTGCTAGCAAGATTCCTATTGCTGTTGACATGGCAAAAGACTATAAGAAGGATGATGATGCTGATTTGTTTAAAAAGATTAAGAGTGATGGGTATATGTATTCAGCAGTTGTTGAATGCTATGAAACTCTCAAGGAAATCACACTGGACCTTCTGCGAGATAGAGAAGATAGGCTGATAATAGAACGTATATGCCGTAAAGTTGAAGATTGCATAGAACAGGAAAAATTTGTCAAGGAATTCAAGATGAGTGGCTTGCCTTCACTCAGTGAGAAGTTGGAGAAATTCTTATCTCTATTGGTAGCTTTTTTTCATCATGCTTCCTTTTTCCCTTTTTTCTCAGTATATTTCCATTCCTTCTTGGTAGACTTATTCAGGTCTTATAAACATTATTTTGTTTCCATTGCCAGCGATATTGTAGAAATTATCATTCAGGATGTTATGGTTGATGGCCATGCAATTCTGCAAACAGCTCAGCATAATAATGTAGAGAGGGGGCAGAGATTTGTTAACATTGACACTTCTTTTACACACAAGAAATCAGTGATGGAAAAGGTGATTAGGCTTCATTTGCTTTTAACAGTGAAAGAATCAGCCATAAATGTGCCCCAAAATCTGGAAGCCCGCCGCCGTATTACATTCTTCGCAAACTCTTTATTTATGAATATGCCAAAGGCTCCTAAAGTTCGGGACATGTTGTCCTTCAGTGTTCTAACACCGTATTACAAAGAAAACGTTCTATATTCTAATGATGAGCTCAATAAGGAAAATGAAGATGGAATAACAATTATATTCTACCTAACGAAGATATATCCTGATGAATGGGCCAATTTCCATGAGCGCATAAAAAGTGATGGTCTTGAAGAAAATAAGGGGGAATTAATTCGTCAGTGGGCATCTTACAGAGGGCAGACACTCTATCGAACAGTGAGAGGAATGATGTACTATTGGCAAGCTTTGGTCCTTCAGTACATCATGGAATATGCAGGAGAAAATGCTATCTCTGAAGGCTATCGGACAGTGGATTTCTATGAAAAAGATAATAGGCTTCTTGAAGAAGCACAAGCTCTGGCTGATTTGAAGTTCACCTATGTTGTTTCTTGTCAATTGTACGGTTCTCATAAAAAGTCCAAAAATCCTAGCGAGAGAAGCCACTATACCAATATTCTCAATCTGATGTTAACATATTCAGCCCTTCGAGTTGCTTACATAGATGAAACAGAAGATACAAAGGGTGGAAAGAAAGTTTATTACTCTGTTCTTGTCAAGGGAGGGGAGAAGTATGATGAGGAAATATATCGCATCAAGCTTCCCGGTCCTCCAACGGAAATTGGTGAAGGGAAGCCTGAAAACCAAAATCATGCCATTATATTTACTCGTGGAGAAGCCTTGCAGACCATAGACATGAATCAGGATAATTACTATGAAGAAGCCTTCAAAATGAGAAATGTATTGGAAGAATTCCGGAAAGGTTATAGAGGGCAACAGAAGCCCACCATACTGGGTCTAAGGGAGCATATATTTACTGGAAGTGTTTCATCACTTGCTTGGTTTATGTCAAACCAGGAGACCAGCTTTGTGACCATTGGCCAACGAATTTTGGCAAATCCTTTAAGGGTCCGATTTCATTATGGTCATCCTGATATATTTGACAGAATCTTCCACATAACAAGAGGTGGTATAAGCAAAGCATCAAAAGTTATCAACTTAAGCGAGGATATATTTGCAGGGTTCAATTCAACTCTACGTCAAGGATTTATCACACATCATGAATACATACAAGTAGGTAAGGGGCGTGATGTGGGCATGAATCAGATTTCACTCTTTGAGGCTAAGGTTGCAAATGGAAATGGAGAACAAACACTTAGCCGTGACGTTTATCGTCTTGGACGACGATTTGACTTCTTCAGGATGTTGTCATTCTACTTCACAACAGTTGGTTTCTATTTCAGTAGCATGATAACTGTGATGACTGTCTATGTATTCTTATATGGACGTTTGTATATGGTATTGAGTGGAGTTGAGAGAGAAATTCTTCAAAGTCCAAACATACATCAGAGCAAAGCCCTTGAACAGGCCTTGGCAACCCAGTCTGTTGTTCAATTAGGCATACTGCTGGTGCTGCCCATGGTTATGGAAATTGGTTTGGAGAAGGGATTTCGCACTGCCTTGGGTGATTTTGTCATCATGCAGTTGCAGCTAGCCTCTGTGTTCTTTACTTTCCAGCTTGGAACAAAAGCTCATTATTATGGAAGAACACTCTTGCATGGGGGTTCTAAATATAGACCAACTGGTCGTGGGTTTGTTGTCTTCCATGCAAAGTTTGCTGATAACTACAGGATGTACTCGCGAAGTCACTTTGTAAAGGGCCTGGAGATACTTATATTATTGATTGTTTATGAAGTCTATGGGGAGTCATATCGCAGCACAAATCTTGCTTTCTTCATCACAATGTCAATGTGGTTTCTGGCCATTTCCTGGTTATTTGCACCTTTCTTGTTCAATCCTTCTGGCTTTGACTGGCAAAAAACAGTGGACGATTGGACAGACTGGAAGCGGTGGATGGGAAACCGTGGTGGCATTGGTATCCCATCTGATAAAAGCTGGGAATCTTGGTGGGATGAAGAAAATGAACACCTGAAATACTCAAATATCAGAGGGAAAATACTTGAGATAATTCTTGCACTTCGCTTCTTTATCTACCAATATGGAATTATCTACCACCTGAATATTTTCCATCGTAGCAAAAGTATTCTGGTATTTGGACTTTCTTGGGCAGTTTTGGTCATAGTCCTTATTGTCTTAAAGATGGTTTCCATGGGTAGACGAAGATTTGGTACCGACTTTCAGCTCATGTTTCGTATTCTCAAGGCACTTCTCTTCCTTGGCTTCTTGTCAGTCATGACTGTATTATTTGTCGTATGTGCCCTTACCATATCAGATCTGTTTGCTGCCATTCTTGCCTTCATGCCCTCCGGATGGGCCATTATTCTGATTGCACAAACATGCAGGGGACTCTTGAAGTGGGCTAAACTATGGGCTTCAGTGAAAGAGCTCTCCAGAGCATATGAATATGTAATGGGATTAGTAATCTTCATGCCAACAGCCGTTTTGTCATGGTTTCCATTTGTGTCAGAGTTCCAAACCCGTTTGCTATTCAATCAAGCATTTAGTAGAGGGCTCCAGATTTCAATGATTCTTGCTGGAAAGAAGGACACTTATAAAACTGATTGA 5805 0.3986 MASTSGTKGPYEMARQPSKRMIRAPTRTVELPNEENMMDSEIVPSSLAVLVPILRAALEIEEENPRVAYLCRFHAFEKAHTMDPTSSGRGVRQFKTYLLHKLEREGELTEKLAKRSDARELQTYYQTFYEKRIRDGEFTLKPEDIIKNVQIATVLYEVLKTMVAPQSIEEKTKRYAEDVEKKRGQYEHYNILPLYAVGVKPAIMELPEIKAAIAALCKVDNLPMPIFRSRPGASNDDSTMPMERVKNVNDILDWISSIFGFQKGNVANQREHLILLLANIDIRNRAESYELREETVEKLMATNFKNYESWCHYVRCKSHLRFPDELDRQQLQLIYIALYLLIWGEASNIRFMPECLCYIFHHMCDDVFGILYSNAHHVSGDAYQIVARDDEYFLREVITPIYEVLMKEAKRGNKGKASHSNWRNYDDLNEYFWSDKCFKLGWPMNQNADFFRRSDEIQTTNQGTSQASTGAGKKKPKTNFVEVRTFLHLYRSFDRMWIFFILALQAMIIIAWSSLGPIGVLSDADVFRNVMTIFITYAFLNFLQVTVDIILIWNALGNMKFTQLLRYFLKFVVAAVWVVVLPVSYSSSLQNPTGLIKFVTSWAGDWGSQSLYTYVVALYMLPNIVAAILFFLPPLRRTMERSNMRIITLLMWWAQPKLYVGRGMHENIFSLLKYTLFWIMLLISKLAFSYYVEILPLVGPTKLIMGMHIDNYQWHQFFPENETHNICVVIAIWAPIILVYFMDTQIWYSIYATLFGGIIGAFSHLGEIRTLGMLRSRFQSVPLAFSQRFWTGRNRKNIQEDSDDSYERYNIAYFSQVWNEFINSMREEDLISNRDRDLLLVPYSSIDVSVIQWPPFLLASKIPIAVDMAKDYKKDDDADLFKKIKSDGYMYSAVVECYETLKEITLDLLRDREDRLIIERICRKVEDCIEQEKFVKEFKMSGLPSLSEKLEKFLSLLVAFFHHASFFPFFSVYFHSFLVDLFRSYKHYFVSIASDIVEIIIQDVMVDGHAILQTAQHNNVERGQRFVNIDTSFTHKKSVMEKVIRLHLLLTVKESAINVPQNLEARRRITFFANSLFMNMPKAPKVRDMLSFSVLTPYYKENVLYSNDELNKENEDGITIIFYLTKIYPDEWANFHERIKSDGLEENKGELIRQWASYRGQTLYRTVRGMMYYWQALVLQYIMEYAGENAISEGYRTVDFYEKDNRLLEEAQALADLKFTYVVSCQLYGSHKKSKNPSERSHYTNILNLMLTYSALRVAYIDETEDTKGGKKVYYSVLVKGGEKYDEEIYRIKLPGPPTEIGEGKPENQNHAIIFTRGEALQTIDMNQDNYYEEAFKMRNVLEEFRKGYRGQQKPTILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRILANPLRVRFHYGHPDIFDRIFHITRGGISKASKVINLSEDIFAGFNSTLRQGFITHHEYIQVGKGRDVGMNQISLFEAKVANGNGEQTLSRDVYRLGRRFDFFRMLSFYFTTVGFYFSSMITVMTVYVFLYGRLYMVLSGVEREILQSPNIHQSKALEQALATQSVVQLGILLVLPMVMEIGLEKGFRTALGDFVIMQLQLASVFFTFQLGTKAHYYGRTLLHGGSKYRPTGRGFVVFHAKFADNYRMYSRSHFVKGLEILILLIVYEVYGESYRSTNLAFFITMSMWFLAISWLFAPFLFNPSGFDWQKTVDDWTDWKRWMGNRGGIGIPSDKSWESWWDEENEHLKYSNIRGKILEIILALRFFIYQYGIIYHLNIFHRSKSILVFGLSWAVLVIVLIVLKMVSMGRRRFGTDFQLMFRILKALLFLGFLSVMTVLFVVCALTISDLFAAILAFMPSGWAIILIAQTCRGLLKWAKLWASVKELSRAYEYVMGLVIFMPTAVLSWFPFVSEFQTRLLFNQAFSRGLQISMILAGKKDTYKTD. 1935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03134 1934 Gene3D - 35 182 IPR023175 -
Seca6g03134 1934 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 250 1926 - -
Seca6g03134 1934 Pfam 1,3-beta-glucan synthase component 1059 1147 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Seca6g03134 1934 Pfam 1,3-beta-glucan synthase component 1152 1747 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Seca6g03134 1934 SMART FKS1_dom1_2 330 445 IPR026899 -
Seca6g03134 1934 Pfam Vta1 like 51 173 IPR039431 -
Seca6g03134 1934 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 333 442 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03134 Seca-Chr6 97700323 97731562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03134 1 1929 Glycosyltransferase AT1G06490 69.412 0.0 2749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03134 K11000 - gmx:100815000 3269.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03134 6 97700323 97731562 Seca6g03134 6 97700323 97731562 ECH