Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03071 ATGATCGAATGGACGAAGCAGTTGAATGCTGCATTTGGAGCTTCGTTTCTTTGGCTGATTTGCTTGATTTACTTCACCCAGGGTTTTAGGTCTTTTGTCTGGACAGCAATTTCCTACCAGCTTAAAGATAATCTTAAGTTGTCACCCTCAGCTTCCCAATTTGTGTTTTCAGTAGCATTTTTCCCATGGAGCATTAAACCATTATATGGAATACTTTCTGATTGTATCCCAATTAAAGGAAGAAAACGGATTCCCTACTTAGTGATTGCAACTGTGCTCTCCCTTGTGCCATGGTTTATTTTAGGCTTAAACTCAACCTTGAGGAATTCAACATGGCACCTGATGGTATTTTTGACCGTGCAAAACTTGGGCTCGGCCATGGCAGATGTTGTGGTTGATGCAATGATAGCTGAGGCAGTAAGATATGACAAGGCCTCATATGCAGGAGACCTCCAGTCAATATCTTGGTCTGCGATGGCTTTGGGAGGAATATGTGGGAGTTTGTTAGGGGGATTTGCATTATCCAATTTACAGATAGATGCTATTTTTCTTCTATTTGCTGTACTACCCTGCATACAGTTATTATCATGCTGTTTTGTGGAGGAGAACTCTGTAAATATCAAATTTTTACCAGAGGATTCTATTGCAAGTGATTCACATATCAATGGTAGTAGTAGTACCCTAGATGAAGATAGTCCTTTAAATAAAAAGTCCCACAGCAGTACAAGAAGAAGAAAGAAGGGCAAAAAGAACACAAAAAATAGAGCAGTAAATACCAGCAAATCAAAGATTCTTGAAAAAGGAAACTCGGTGGCATTAAAGTGGTTCCATTCTTTGAAAGAAGCAATTTACGATTTGTGTCGTGCATTTAGACAGCCAATGATTTTTAGACCTATGTGTTGGTTTTTCCTTGCCCATGTTACTGTTCCCAATCTTTCAACAGTCATCTTCTACTACCAAACAGAGGTTCTGAAGCTGGAAGCATCTTTCCTGGGGACAGCACGGGTTGTTGGGTGGTTAGGACTCATGCTCGGCACCTTCGTTTATAATCGCCACCTAAAGTTTATGACCCTAAGAAGAATTCTCATGTGTGCTCATATTGGGTTGGCCTTCTTGAATCTTCTGCAGATTGTTGTAGTGTCTAGGACAAATATTGCCTTTGGAGTATCAGACAAGATTATGGTGCTCTTTGGCTCAGCTCTTGCAGATGGAGTCAATCAATTCAAGTTTATGCCTTTCTTGATCTTATCTGGACAACTATGTCCTCCTGGAATTGAAGGGACTTTATTTGCCCTTTTCATGTCAATAAACAATTTGGGATCAACAGTGGGGTCTTTTGTGGGTGCCGGGTTGGCTTCTGTACTGAACATCGATTCAGGATCATTTGATAATCTTCTCTTGGGCATCATTATTCATACCTTGTGCAATTTCATTCCAATTGCTTTTCTGTTTCTGATACCAAAGGAAGCTACAGGAGCATAG 1482 0.4035 MIEWTKQLNAAFGASFLWLICLIYFTQGFRSFVWTAISYQLKDNLKLSPSASQFVFSVAFFPWSIKPLYGILSDCIPIKGRKRIPYLVIATVLSLVPWFILGLNSTLRNSTWHLMVFLTVQNLGSAMADVVVDAMIAEAVRYDKASYAGDLQSISWSAMALGGICGSLLGGFALSNLQIDAIFLLFAVLPCIQLLSCCFVEENSVNIKFLPEDSIASDSHINGSSSTLDEDSPLNKKSHSSTRRRKKGKKNTKNRAVNTSKSKILEKGNSVALKWFHSLKEAIYDLCRAFRQPMIFRPMCWFFLAHVTVPNLSTVIFYYQTEVLKLEASFLGTARVVGWLGLMLGTFVYNRHLKFMTLRRILMCAHIGLAFLNLLQIVVVSRTNIAFGVSDKIMVLFGSALADGVNQFKFMPFLILSGQLCPPGIEGTLFALFMSINNLGSTVGSFVGAGLASVLNIDSGSFDNLLLGIIIHTLCNFIPIAFLFLIPKEATGA. 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03071 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 3 490 IPR039309 -
Seca6g03071 493 CDD MFS_FBT 18 484 - -
Seca6g03071 493 MobiDBLite consensus disorder prediction 239 256 - -
Seca6g03071 493 Pfam BT1 family 27 488 IPR039309 -
Seca6g03071 493 NCBIfam folate/biopterin family MFS transporter 19 488 IPR004324 GO:0016020
Seca6g03071 493 MobiDBLite consensus disorder prediction 223 258 - -
Seca6g03071 493 Gene3D MFS general substrate transporter like domains 14 482 IPR036259 -
Seca6g03071 493 SUPERFAMILY MFS general substrate transporter 15 489 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03071 Seca-Chr6 96823469 96828353 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03071 - - gmx:100781251 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03071 6 96823469 96828353 Seca6g03071 6 96823469 96828353 ECH