Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03068 ATGGGACTCAAACTCATTATAACGGTTTTATTGGTCGTGTCAGTAACTGCCACAGCTGATTACATTCGACCTCCGCCTCGAAAAGCATTACATCTCTCATGGGATTCAAAACCCTCTTCTTACCCTCAGCAGGTACACATTTCTTTGGCAGGAGACAAGCACATGAGAATTACTTGGGTTACTGATGATAATTCTGCTCCTTCAGTTGTAGAATATGGAACATTGCCAGGGAGATATGACTCTATAGCTGAAGGAGAGACCACCTCCTATAGTTATCTGTTCTATAGCTCAGGAAAAATACACCATACCGTGATTGGTCCTTTAGAGCATAATTCTGTGTACTTTTACCGATGTGGTGGCCAAGGTCCTGAGTTCCAGCTCAAAACTCCTCCAGCTCAATTTCCAATTACTTTTGCTGTGGCTGGGGATCTAGGTCAAACTGGTTGGACTAAATCAACATTGAATCACATTGACCAATGTAAATATGATGTTCAACTGCTTCCAGGAGACCTTTCATATGCTGATTATATCCAGCATCGCTGGGACACATTTGGTAGGCTTGTGGAGCCACTTGCTAGTGCAAAACCATGGATGGTGACACAAGGGAACCATGAAGTGGAGAACATACCCTTGTTGAAGGATGGCTTTGTATCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGTGGATCAAGTTCAAATCTCTATTATTCTTTTGAGGTTGCAGGTGTTCATGTTATCATGCTTGGCTCCTATGCAGATTCTGATGTGTACTCAGAACAATATAGATGGCTAAAGGAAGATCTATCAAAGGTGGACAGGAAAAGGACACCTTGGTTGGTTGTGTTATTTCATGTCCCATGGTATAATAGTAATGCGGCTCATCAAGGTGAAGGGGGTGATATGATGGAAACTATGGAGCCATTGCTTTATGCTGCTAGTGTTGATTTAGTTTTTGCTGGTCATGTGCACGCTTATGAGCGCTCGGTATGCTTATGTGGTTTAGAGTTTCATTTCTTTAAACGTGTATATAATGGAAGAGTGGATCCTTGTGGTGCTGTGCATATAACAATTGGTGATGGAGGGAATAGAGAAGGCTTAGCTTCTAAGTATATAGATCCACAGCCACAATGGTCAGAATTCCGTGAAGCCAGTTTTGGTCATGGTGAGCTAAAGATTGTAAACTCCACACATGCCTTCTGGAGTTGGCACAGGAATGATGACGATGAACCAGTAAAATCTGATGATATCTGGATAACCTCTTTGGTCAGCTCAGGATGTGTTGATCAGAAGAGAAATGAACTCAGCCATACACTTATGACACCCTAA 1332 0.4212 MGLKLIITVLLVVSVTATADYIRPPPRKALHLSWDSKPSSYPQQVHISLAGDKHMRITWVTDDNSAPSVVEYGTLPGRYDSIAEGETTSYSYLFYSSGKIHHTVIGPLEHNSVYFYRCGGQGPEFQLKTPPAQFPITFAVAGDLGQTGWTKSTLNHIDQCKYDVQLLPGDLSYADYIQHRWDTFGRLVEPLASAKPWMVTQGNHEVENIPLLKDGFVSYNSRWKMPFEESGSSSNLYYSFEVAGVHVIMLGSYADSDVYSEQYRWLKEDLSKVDRKRTPWLVVLFHVPWYNSNAAHQGEGGDMMETMEPLLYAASVDLVFAGHVHAYERSVCLCGLEFHFFKRVYNGRVDPCGAVHITIGDGGNREGLASKYIDPQPQWSEFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDIWITSLVSSGCVDQKRNELSHTLMTP. 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03068 443 SUPERFAMILY Metallo-dependent phosphatases 135 413 IPR029052 -
Seca6g03068 443 Pfam Calcineurin-like phosphoesterase 137 327 IPR004843 GO:0016787
Seca6g03068 443 Pfam Iron/zinc purple acid phosphatase-like protein C 354 410 IPR025733 -
Seca6g03068 443 Gene3D - 41 132 - -
Seca6g03068 443 SUPERFAMILY Purple acid phosphatase, N-terminal domain 34 131 IPR008963 GO:0003993|GO:0046872
Seca6g03068 443 Gene3D - 133 431 IPR029052 -
Seca6g03068 443 Pfam Purple acid Phosphatase, N-terminal domain 42 122 IPR015914 GO:0003993|GO:0046872
Seca6g03068 443 CDD MPP_PAPs 133 422 IPR041792 -
Seca6g03068 443 PANTHER ACID PHOSPHATASE RELATED 8 421 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03068 Seca-Chr6 96804965 96809383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03068 42 434 Miscellaneous Gene Families AT2G03450 26.681 3.01e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03068 K22390 - gmx:100782338 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03068 6 96804965 96809383 Seca6g03068 6 96804965 96809383 ECH