Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03066 ATGGATTGCAGAAACAGGGACTTGTTTACAGAGGATCACACTTCTTCTTCTTGTGCATCACTGAGCGAGGCCTTGCTCTTCGCCACCATGTGCATCATTGGCCTCCCAGTTGACGTTCACGTTAAGGATGGCTCTGTCTATTCTGGAATCTTCCACACTGCTTCTGTTGACGCCGATTACGGTATTGTTTTGAAGAAAGCAAGGATGACCAAGAGGGGAAAGGGCAACACCAATGTGGGAGAGGAGGGCTTGATAGATACGCTAGTGATTCTATCAGGTGATCTTGTACAAGTTGTTGCTAAGGGAGTAATGCTTCCTGCAGATGGGATTGGTGGAAATATAACTGGTGATGATGAGGAAGCAGTTGTGCACAATGTTTGTTGTTCCGAGAATCTAACATGTGAGGCAGAGAATCATACAGGACCTTTGATGGATGTAGAAAAGGTTAATCAATCAAGACAAGCTGGAGATGACAACTCAAAAGTGAAAGCTGATGACAGCAGACAAAAGTCTGAGTTTGTTAACGAAAAAATTGATGAAAAGATTCAAGGCCTCAATTTGGACAATGAAATTTATACATGTCGTGACCAAGTGGAAGCTGTTGATCGTGGAAGCGCTGATATGACATCAAGTCCTTCTGATGATGGGTCATTCTGCAATAATGCCCCTGCATCTCCTAACGTCAATGATCACTGTAGTGAAAGGTCTACTTCAGCAGACTCTGCTGCTACAAATTCCACTCAAGGTGTGGTGGAGCTCATTGAAGAGTCACATAATTTGCCAGCAAATTCTGTTGAAATATCCGTCCTAAGGGGTACAGATTCTACCAGAAATGCTAAGGAATTTAAGCTCAACCCAGCTGCCAAAATTTTCTCCCCATCTTTTGTAAATCCTATTGCAGCAACTACTGTGCCAACTGCTGCAAACATGGTTTACATACCAAATAGCTCTCCTGTGGTACCTGTTGCAACTATTCAACCAGAAGTTGGATTCAATACGTATGCTTCTCGACCTTCTGTGCCTGTTAAGGTTGCACAGTATAGTAATTTGATTGTGGGAAATGGCGGCAGTGATTCTCAATTTTCACAACCAATTGTGGGACAACTGACACACAGGACACAACCTCTGCGGTATGCAGCAAATTACACTCCTGTTTTGTCTGAACCTGCTTATTTGCAACCAAGTTCTCCTGCTGTAAGTACAAAAAGTTATATGCCATCTAGCTAA 1227 0.4303 MDCRNRDLFTEDHTSSSCASLSEALLFATMCIIGLPVDVHVKDGSVYSGIFHTASVDADYGIVLKKARMTKRGKGNTNVGEEGLIDTLVILSGDLVQVVAKGVMLPADGIGGNITGDDEEAVVHNVCCSENLTCEAENHTGPLMDVEKVNQSRQAGDDNSKVKADDSRQKSEFVNEKIDEKIQGLNLDNEIYTCRDQVEAVDRGSADMTSSPSDDGSFCNNAPASPNVNDHCSERSTSADSAATNSTQGVVELIEESHNLPANSVEISVLRGTDSTRNAKEFKLNPAAKIFSPSFVNPIAATTVPTAANMVYIPNSSPVVPVATIQPEVGFNTYASRPSVPVKVAQYSNLIVGNGGSDSQFSQPIVGQLTHRTQPLRYAANYTPVLSEPAYLQPSSPAVSTKSYMPSS. 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03066 408 MobiDBLite consensus disorder prediction 151 170 - -
Seca6g03066 408 PANTHER ATAXIN 2-RELATED 158 399 IPR045117 GO:0003723
Seca6g03066 408 MobiDBLite consensus disorder prediction 150 170 - -
Seca6g03066 408 Pfam Ataxin 2 SM domain 23 101 IPR025852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03066 Seca-Chr6 96786384 96794866 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03066 - - gmx:100794683 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03066 6 96786384 96794866 Seca6g03066 6 96786384 96794866 ECH