Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03042 ATGCTTCTGTGTTCTACTACAAACCGGTGTGGCATTGCTAACCAATTTTTTGTGCATACTTTTGGATCCCTATATTTGTTACAGGCACGATCAATACAAGAACTTGGCCGGAAGAAGTTTGAGAAGTTAAGGATTGGCTTTGAACGCTCTCAGATTGAGCTGAAATCAGAACAAAAAACACGATCTAATTCTTTAGTGAAGAAGTCAGTAAAGAAGCCACTGGGTTGTGCCTCACAGGAGCCTGTTGGCTTTGATTTCTCATCAGGGGCAACTCTTGTCACCATTGGAGATGTACAGCCAATTTCCTATCCAATGCAAGGTGGTAGCTGTGAGAGGCCTGGCAACATTGATGGTATTGTGGAGGGGAATGCTTTCTTGATTGAAGCAAATCAAGAGAAGGCTGAAGATGTTTTGTCAGGGAAGGGTCAGCTCTCTAAGTTTGGAAGGAAGTCATCTGTGCTTGATGAGAATCGCCGTGCATCATATAATATGTCTAATCAACCAATTACTAGATCAGATTCAATATTTATGACCTTTGAGAGTGAAATGAAGCATCTGGTTACTGTTGGACTTCATACAGAATATTCCTATGCTAGAAGCTTGGCTCGTTTTAGTGCATCTCTAGGACCTATTGCTTGGAAACTTGCTTCCCACAGGATTCAACAGGCACTTCCAGCTGGTTGCAAATTTGGTCATGGTTGGGTTGGAGAGTACGAACCGTTTCCAACTCCAATATTAATGCTCAATAATCGTGTCCAAAAAGAAACTAGTTTGGTTATGAAGTTGCATTCCACCACTGAATTACTAAAGGGTGGCAAAAGTAGTAAGAATGTGGAAACTGGCATTGAACATCCTGTTAATGGGCAGATGCTTGAGGGAAAACATACTTCAATTTGTCCTGCCAGTGGGACTGCATCTGGAGGAAATCCATTGTTTGGTTCTGCTGGAGTGAGGCCCAATGCTTCTCTCAACCTCCTAAATCAGAAGCAGAATGTCCAACCCAGGAATTTTGACCATTCTGAGAGTAAGGGGGAGTTGAGTTCTTTACCCTCAGGTAATCAAAATAATTCCAGTCTAATTGCAAAGTTTACAAGTAATGCTCCTACAGCAGAGGCCAAGCCTAGAGACATGGTCCCAAGGAACATGAATGCTTTTCCATCTACACCTTTCAAGCAGTCAAATGCTAATGGAGTTGTTAGTGGAGAGTTGCCTGATGGAGAAGTCATGAATACAAGTTTGAATAGCCAGGTGACTGGTCCATCATCTGAAAGTACATCAATCCAAACATCCAGAGCAGCTCCTTTTGTGGTCCATGGGCAGCAGCAAGGTCTCGGAGACCCAGTTCAGTCAATGAGAATGTTTGCAGAAAAGGCTCAAAAGCAACAGGCTTCTTCTAACCATTCACCAGTTGATACTCCACCAGTGACACCATCAGCTCCATCTGGGCAAAGCAATGACTCGGGCAATGCTGCAGCAGCAGCTGCCCGTGTATGGATGTCTGTAGCGGCTGGAGGGTTTAAACAAGGACCTGAAAATTCTATTTCAGCCAAAAACCAGATCTCTGCAGATTCTTTGTACCAAATGAGACAGTTCCATCAGCATATTTCACAAATTCGAGGGGAGTTTCCTTCTGGTGGAATGTCTTTCCAGTCTGATAAGAACAATTTTCCATTTAAGGCACTTGGACCTCAACCTATTCACACAGGCACTGTTTCACAGTTTCCCAACCAATCTATGGTTTTTCCTCAATTAGCGTCTCCTGACCAATCTAGATTGCAAATGCAGTCCTCTTGGAGAGGTCTCAGTCCCTGTAGCCAACCAAGGCAGAAACAGGAAGCTCTTGCGCCTGACTTAAACATTGGCTTTCAATCTCCAGGATCACCGGCGAAACAATCTTCTGGTGTCCTTGTTGATTCGCAGCAACCAGACCTAGCTTTGCAACTATGA 1947 0.4381 MLLCSTTNRCGIANQFFVHTFGSLYLLQARSIQELGRKKFEKLRIGFERSQIELKSEQKTRSNSLVKKSVKKPLGCASQEPVGFDFSSGATLVTIGDVQPISYPMQGGSCERPGNIDGIVEGNAFLIEANQEKAEDVLSGKGQLSKFGRKSSVLDENRRASYNMSNQPITRSDSIFMTFESEMKHLVTVGLHTEYSYARSLARFSASLGPIAWKLASHRIQQALPAGCKFGHGWVGEYEPFPTPILMLNNRVQKETSLVMKLHSTTELLKGGKSSKNVETGIEHPVNGQMLEGKHTSICPASGTASGGNPLFGSAGVRPNASLNLLNQKQNVQPRNFDHSESKGELSSLPSGNQNNSSLIAKFTSNAPTAEAKPRDMVPRNMNAFPSTPFKQSNANGVVSGELPDGEVMNTSLNSQVTGPSSESTSIQTSRAAPFVVHGQQQGLGDPVQSMRMFAEKAQKQQASSNHSPVDTPPVTPSAPSGQSNDSGNAAAAAARVWMSVAAGGFKQGPENSISAKNQISADSLYQMRQFHQHISQIRGEFPSGGMSFQSDKNNFPFKALGPQPIHTGTVSQFPNQSMVFPQLASPDQSRLQMQSSWRGLSPCSQPRQKQEALAPDLNIGFQSPGSPAKQSSGVLVDSQQPDLALQL. 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03042 648 MobiDBLite consensus disorder prediction 335 354 - -
Seca6g03042 648 MobiDBLite consensus disorder prediction 455 491 - -
Seca6g03042 648 MobiDBLite consensus disorder prediction 586 648 - -
Seca6g03042 648 MobiDBLite consensus disorder prediction 455 490 - -
Seca6g03042 648 MobiDBLite consensus disorder prediction 586 609 - -
Seca6g03042 648 MobiDBLite consensus disorder prediction 624 648 - -
Seca6g03042 648 PANTHER BROMODOMAIN CONTAINING PROTEIN 25 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03042 Seca-Chr6 96509928 96512636 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03042 K22184 - gmx:100792844 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03042 6 96509928 96512636 Seca6g03042 6 96509928 96512636 ECH
Seca6g03042 6 96509928 96512636 Seca6g03042 6 96509928 96512636 PCT