Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03023 ATGGCATTATTTTTCCATTCATGGTTCATCAGTGTGTGTGTGATGCATGTATGGATTCAATTGTCTGTATACCAAATAATTTTCAATTTGCAGGCAGTGGTTGTTAGTATTGATCCCCGTAGAGTCTACATCAAGGATCCTAATGATGTGCAATTCAAGACCATCAGAGTTTCAAGTCTAGGTCCAAATGGAGAAGAATATGCCTGGTATCAGTGTACAGTTAATGGGGGGCGAGAAGGCCGACCAATTGGTGCTTATGAACTAGCAAAAGCAGTTGAAGAGCTTGGTGCTGGAGAAATACTACTTAATTGCATTGATTGTGATGGTCAAGGGAAAGGATTTGATGTAGATTTAATAAAGTTGATCTCAGATGCTGTAAGTATCCCTGTGATCGCAAGTAGTGGAGCTGGTGTTCCTGAACACTTTTCCGAGGTGTTTGCTAAAACAAATGCATCTGCTGCACTTGCTGCTGGCATTTTTCATAGGAAGGAGGTTCCTATTCAATCAGTCAAAGAACATTTGTTGAAGGAAGGCATTGAAGTCCGAATATGA 552 0.4058 MALFFHSWFISVCVMHVWIQLSVYQIIFNLQAVVVSIDPRRVYIKDPNDVQFKTIRVSSLGPNGEEYAWYQCTVNGGREGRPIGAYELAKAVEELGAGEILLNCIDCDGQGKGFDVDLIKLISDAVSIPVIASSGAGVPEHFSEVFAKTNASAALAAGIFHRKEVPIQSVKEHLLKEGIEVRI. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03023 183 SUPERFAMILY Ribulose-phoshate binding barrel 27 182 IPR011060 -
Seca6g03023 183 Pfam Histidine biosynthesis protein 27 165 IPR006062 GO:0000105
Seca6g03023 183 Gene3D Aldolase class I 21 183 IPR013785 -
Seca6g03023 183 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H IGP SYNTHASE SUBUNIT HISF/H 28 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03023 Seca-Chr6 96325602 96330131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03023 K01663 - gmx:100815533 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03023 6 96325602 96330131 Seca6g03023 6 96325602 96330131 ECH