Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02999 ATGGCAGTGACAGATGCACAAAATCCTCTTCTTGGAGAAAACACCTGCAGTTCCTTGTTAAATAAGCTGCAGGAAATATGGGATGAGGTTGGTGAGAGTGATGAGGAGCGAGACAAGATGCTTCTTCAGATAGATCAGGAGTGCTTGGATGTGTACAAGAGAAAGGTTGAGCAGGCTGCTAAGTCAAGGGCACAGCTACTTCAATCCTTGTCTGATGCTAAGCTTGAGCTTTCAAGTCTTCTATCAGCTCTTGGTGAAAAGGGCATCACAGGAATTCAGCCTGAAAAGACTTCAGGAACTATCAAGGAACAGCTTGCAGCTATAGCACCAGTGCTGGAACAGTTATGGCAGCAAAAGGAGGAAAGGATAAAAGAGTTTTCAGATGTACAGTCACAAATCCGAAAAATATGTGGAGAGATAACTGGGGACTTGAACCCTGATCAGACAGGATCATTTGCAGTTGATGAGTCTGACTTGTCACTGAAGAAGTTAGATGAATATCAATCCCAACTCCAAGAACTTCAAAAGGAAAAGAGTGAGAGGTTGCACAAGGTTCTAGAATTTGTGAGTACTGTGCACGATCTTTGCGCTGTCCTTGGTATGGACTTCTTCAGTATTGTGACAGAGGTTCATCCAAGCTTAAATGATTCTACTGGTGTTCATTCCAAAAGCATAAGCAATGGCACCCTAGCTAGGCTTTCTAATACAGTCTCAACACTGAAAGAAGATAAAAAGCAGAGGCTGTACAAGCTCCAAGAATTAGCTTCTCAGCTTATTGATCTGTGGAATCTAATGGATACCCCTCAAGAAGAAAGGAGACTATTTGACCATGTTACCTGTAATATGTCAGCTTCTGTAGATGAAGTCATTGTTCCTGGGGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAAGTGGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGCAGGATGAAAGAGATTGCTTTCAAAAAGCAAGCTGAACTTGAAGAGATATTTGCCCGTGCTCATATGGAAATAGACCCAGAAGCTGCTCGAGAGAAGATTTTATCACTGATTGATTCTGGAGACATTGAACCGGCTGAATTACTGGAAGACATGGACAAACAGATAGCAAATGCAAAAGAAGAAGCTTTAAGCCGAAAAGAAATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGCTGGCTTGAAGACTATAATCGGGATGAAAACAGGTATAATGCAAGTAGAGGTGCACACTTGAACCTCAAACGTGCAGAGAAAGCTCGGATACTGGTCAACAAAATTCCAGCTTTGGTTGATACGTTGATTGCTAAAACTCGATCTTGGGAGGAAGTACATAGCGTGTCATTCACATATGATGGTGTTCCTCTTCTTGCTATGTTGGATGAATATGCCATGCTAAGGCATGAACGGGAAGAAGAAAAACGAAGGATGAAGGACCAGAAAAAGTATCATGAGCAGCAAAACACAGATCAGGAATCTGTCTTAGGTTCACGACCCAGCCCGGCTCGGCCACTAGGCAACAAGAAGGTAGTTGGCCCTCGTCCTAATGGTACTCCTAACCGACGGCTATCTCTTAATGCTCATCAAAATGGAAGCAGGTCCACAATGAAAGATGGAAAGAGGGATAGTACTAGACCAGTTGCTCCATTGAATTATGTGTCCATGTCAAAAGAAGATGCTGCTTCACATGTTTCTGGTACTGAACCAGTCCCAACATCACCCTAA 1746 0.4318 MAVTDAQNPLLGENTCSSLLNKLQEIWDEVGESDEERDKMLLQIDQECLDVYKRKVEQAAKSRAQLLQSLSDAKLELSSLLSALGEKGITGIQPEKTSGTIKEQLAAIAPVLEQLWQQKEERIKEFSDVQSQIRKICGEITGDLNPDQTGSFAVDESDLSLKKLDEYQSQLQELQKEKSERLHKVLEFVSTVHDLCAVLGMDFFSIVTEVHPSLNDSTGVHSKSISNGTLARLSNTVSTLKEDKKQRLYKLQELASQLIDLWNLMDTPQEERRLFDHVTCNMSASVDEVIVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQAELEEIFARAHMEIDPEAAREKILSLIDSGDIEPAELLEDMDKQIANAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLIAKTRSWEEVHSVSFTYDGVPLLAMLDEYAMLRHEREEEKRRMKDQKKYHEQQNTDQESVLGSRPSPARPLGNKKVVGPRPNGTPNRRLSLNAHQNGSRSTMKDGKRDSTRPVAPLNYVSMSKEDAASHVSGTEPVPTSP. 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02999 581 FunFam 65-kDa microtubule-associated protein 6 371 504 - -
Seca6g02999 581 Coils Coil 463 483 - -
Seca6g02999 581 Coils Coil 157 184 - -
Seca6g02999 581 Coils Coil 300 320 - -
Seca6g02999 581 MobiDBLite consensus disorder prediction 526 540 - -
Seca6g02999 581 MobiDBLite consensus disorder prediction 478 581 - -
Seca6g02999 581 MobiDBLite consensus disorder prediction 478 495 - -
Seca6g02999 581 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 508 - -
Seca6g02999 581 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 13 568 IPR007145 GO:0000226|GO:0008017
Seca6g02999 581 MobiDBLite consensus disorder prediction 565 581 - -
Seca6g02999 581 Gene3D - 371 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02999 Seca-Chr6 95977202 95982146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02999 13 542 EF-hand Containing Proteins AT5G62250 43.358 2.70e-126 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02999 K16732 - zju:107403625 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02999 6 95977202 95982146 Seca6g02999 6 95977202 95982146 ECH
Seca6g02999 6 95977202 95982146 Seca6g02999 6 95977202 95982146 PCT