Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02997 ATGGGAGACAATGTTGTAGTGTCCAATATGGAGCTAGAGAGGTTGCTTAGTATGAAAGGAGGCAAAGGAGAGGCTAGCTATGTCAACAATTCCCAAGCACAGGCCATACATGCGAAGTCAATGCTTCACCTTCTGAAAGAAACCCTAGATGGAGTTGAGCTTGAAGCCCCTGAGATTCCATTTGTGGTGGTGGACTTGGGGTGTTCATGTGGAAGCAACACAATCAATGTGATGGATGTGATAATCAAACACATCATTAAGCGCTATGAGGCTTTAGGATTGAACCCACCAGAGTTCTCTGCTTTTTTCTCTGACCTTCCAAGCAATGACTTCAACACACTCTTTCAGCTTCTCCCTCCACTTGCCAACTATGGAGTTAGCATGGAAGAGTGCCTTGCTGCCAACAACCACCGCTCTTACTTTGCCGCCGGTGTCCCCGGCTCTTTCTACCGGAGGCTTTTTCCGGCGAGGTCCATTGACGTTTTCCACTCTGCCTTTTCTCTGCATTGGTTATCTCAGGTACCAGAATCTGTTCTGGACAAGAGGTCAAGTGCATACAACAAGGGCAGGGTGTTTATCCATGGTGCTAGTGAGATCACAGCAAATGCTTACAAGAAACAATTCCAAACAGACTTGGCAAGCTTCCTGAGCTCAAGGTCTGTGGAGATGAAGAGAGGGGGGTCCATGTTTTTGGTTTGTTTAGGCAGAACTTCAGTGGACCCCACTGACCAGGGTGGGGCTGGCCTCCTATTTGGGACCCATTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGATTAATTAGCAATGAGAAACGAGACAATTTCAACATTCCAGTTTATGCACCAAGCCTGCAAGACTTCAAGGAGGTGGTTGAAGCTGATGGTTCATTTACCATAAACAAGCTTGAGGTTTTCAAAGGAGGAAGCCCTCTTGTGGTGGACCAGCCAGATGATGCAAGTGAAGTAGGCAGGGCTTTAGCCAACAGCTGCAGGAGTGTGTCTGGTGTCCTTGTTGATGCTCATATTGGTGACAAGCTTAGTGAGGAGCTGTTTCTGAGAGTGGAACACCGAGCCACAAGTCATGGCAAAGAGTTATTAGAGAAACTACAGTTCTTTCACATTGTTGCATCCCTTTCTCTTGCTCTATGA 1152 0.4705 MGDNVVVSNMELERLLSMKGGKGEASYVNNSQAQAIHAKSMLHLLKETLDGVELEAPEIPFVVVDLGCSCGSNTINVMDVIIKHIIKRYEALGLNPPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARSIDVFHSAFSLHWLSQVPESVLDKRSSAYNKGRVFIHGASEITANAYKKQFQTDLASFLSSRSVEMKRGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISNEKRDNFNIPVYAPSLQDFKEVVEADGSFTINKLEVFKGGSPLVVDQPDDASEVGRALANSCRSVSGVLVDAHIGDKLSEELFLRVEHRATSHGKELLEKLQFFHIVASLSLAL. 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02997 383 Pfam SAM dependent carboxyl methyltransferase 60 380 IPR005299 GO:0008168
Seca6g02997 383 Gene3D Vaccinia Virus protein VP39 30 309 IPR029063 -
Seca6g02997 383 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 17 362 IPR005299 GO:0008168
Seca6g02997 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 380 IPR029063 -
Seca6g02997 383 Gene3D - 16 362 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02997 Seca-Chr6 95961765 95965722 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02997 K18848 - gmx:100801476 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02997 6 95961765 95965722 Seca6g02997 6 95961765 95965722 ECH
Seca6g02997 6 95961765 95965722 Seca6g02997 6 95961765 95965722 PCT