Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02978 ATGAACAGAAGGAACACCTTGCTCCTGAAGATACTGCTGTTCCTCTTCGCCCTCAACTCCCTCTCTCTCTTCCTCTACTTCACACATCACCATTCCTCTCCAAAACCTTCTTCACACTCCAAGACTCACGACTCTCTCTCACTCACACCCTTTCGACGACCCTTTGGAGAAGCTCACCAAACCCACTCCTCAAAACCATGGCCTATCTTACCCTCTTATCTCCCCTGGTCTCAAACCTCCACCTCTGTTCCTCGTCGCTCTTGCGAGGGATATTTCGGAAACGGCTTCACGCGCCGCCTTGACGTCCTCCCCTCCGGTGGCGGAGCGGGGTGGTTCCGATGCTGGCACAGTGAGACCCTCAGGAGCTCCATATGCGAGGGGGGACGGGTTCGCATGGTGCCGGAGAGGATTCAGATGGCGAAGGGTGGTGAGTCTCTGTTGGAGGTTATTGGGAGAGGGGAAGAGGAGGAGCTACCCGTGTTCCAAAACGGTGCGTTCGAGGTTGATGGTGGTGAAGGGTTTGGTGGGGAGAAAGAGAAGATGGTCGTTGACCATGAGTTCTTGGATCAGTATGTGCCTCAAGGTGAGGTTATGAGGCACACCATGCGTGATTTGATTAGTAAGATTCGGATCGTTGGAGGGAAGGACTTTGCTTGTGATGAGTGGATTGAGGAACCAACACTTCTGGTGACACGCTTTGAATATGCTAATCTTTTTCACACAGTTACAGACTGGTACAGTGCATATGTTTCTTCTAGAGTTACTGGCCTTCCTAATCGACCTCATTTGGTTTTTGTAGACGGCCACTGTATGGTATGCATGATCAGCTTTGCTCCACTTGAAGAGACATGGAAAGCATTATTCTCAAGCCTCAGATATGCTAAAAATTTCAGTGGTACAGTTTGTTTTCGTCATGCTATTCTCTCACCTTTGGGATATGAGACTGCACTATTTAAAGGACTAACAGAAGATATAAGTTGTGATGGAGCTTCTGCACAAGAACTGTGGCAAAAGCCTGATAACCAAAAAACTGCACGGCTTTCTGAGTTTGGAGAAATGATCAGAGCAGCATTTGGGCTACCTTTAAACTTACACCATGTTGGAAAAGCAGCCTCTGGACATAATGTCCTCTTTGTTCGTCGTGAAGATTATTTAGCTCATCCACGTCATGGTGGTAAAGTTGAATCAAGACTAAGTAATGAGCCAGAAATCTTTGACTCCTTGAAGAGCTGGGCACTTAATTATAAAGGGTGTAAAATTAACCTTGTCAATGGATTGTTTGCGCACATGTCAATGAAGGAGCAGGTACGAGCCATTCAAGATGCATCGGTTATCATTGGTGCCCATGGTGCTGGTCTTACTCACATAGTATCTGCATTGCCTAAAACTGTGATTCTGGAGATTATCAGCAGCCAATTCAGACGCCCTCATTTTGCATACATTGCCCGGTGGAAAGGGTTGGAGTATCATGCAATTAACCTTCGTGGATCATATGCCAATCCTGGAACCGTGATCAATGAGTTGGCCAGCATTATGAAAAGCCTTGGGTGTTGA 1554 0.471 MNRRNTLLLKILLFLFALNSLSLFLYFTHHHSSPKPSSHSKTHDSLSLTPFRRPFGEAHQTHSSKPWPILPSYLPWSQTSTSVPRRSCEGYFGNGFTRRLDVLPSGGGAGWFRCWHSETLRSSICEGGRVRMVPERIQMAKGGESLLEVIGRGEEEELPVFQNGAFEVDGGEGFGGEKEKMVVDHEFLDQYVPQGEVMRHTMRDLISKIRIVGGKDFACDEWIEEPTLLVTRFEYANLFHTVTDWYSAYVSSRVTGLPNRPHLVFVDGHCMVCMISFAPLEETWKALFSSLRYAKNFSGTVCFRHAILSPLGYETALFKGLTEDISCDGASAQELWQKPDNQKTARLSEFGEMIRAAFGLPLNLHHVGKAASGHNVLFVRREDYLAHPRHGGKVESRLSNEPEIFDSLKSWALNYKGCKINLVNGLFAHMSMKEQVRAIQDASVIIGAHGAGLTHIVSALPKTVILEIISSQFRRPHFAYIARWKGLEYHAINLRGSYANPGTVINELASIMKSLGC. 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02978 517 PANTHER GLYCOSYLTRANSFERASE 9 494 IPR007657 GO:0016757
Seca6g02978 517 Pfam Glycosyltransferase 61 339 466 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02978 Seca-Chr6 95755017 95759840 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02978 K03714 - gmx:100810186 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02978 6 95755017 95759840 Seca6g02978 6 95755017 95759840 ECH