Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02975 ATGGGATTCTCGGTGGCAGCTTCATTGGGTTCCCATATTGTTCTGAGAGGCACTCATGAAACAAAAATCAAGTGCCAATTATTCTACAGAACAGAGCAGAATAGCGTTGGTTTCAAGTTCTCAAAGCATAAGGCCATTCAAAGAGCAATTTTTCTAACCAAGCAAGAGTCAATTGAATTGGATGAGAGGAAGAGCGCAAATGAGGTTAGAGAAGAGATCAAACTATGTTATGAACTCATAAACAGATTGGGAAGAGGAGTTGTGTATCTGGGTTCTTCAAGGATGGGCCCCGGCCATTCACATTATGTGCAAGCACAAGGGCTGGCTAAAGAGGCAAGATTGAGACAGTGGAAAGTGTCTTCTTTAGAAGATATGATCATTTTTTCCATACATCTTGCTGTGCAGATAGCAAACCTTTTGGACTGCACTACATGGTCAGGGGCTGGACCAGGGCTAATGGATGCTGTTACTCAAGGTGCTATGCTGGCAGGAAAACCAGTTGGTGGATTCAAGATAGGAAAAGAAGCAGGGGAATGGACAGCATCCAACTTCCATCCTTACTTACCATCAGAAAATTACCTTACCTGCAGGTTTTTCTCTGCGAGGAAGCATGGGCTGGTTGATGCTGTAGTGAGGAACGATTCATTTGATAAGACTGCTGTTGTTGCGCTTCCTGGTGGGATTGGTACTCTAGATGAGTTGTTTGAGATAATGGCATTAATTCAGCTAGAACGGATTGGATCAAAGCTTCCTGTTCCCTTCCTGTTGATGAACTATGATTCATTTTATTCAAAGTTGCTTGACTTTTTAAATGTTTGTGAGGATTGGGGAACTGTCTCTAAAGGAGAGGTTGCATCATTGTGGAAGGTTTGTAACAGCAACTCAGAAGCTCTGGCTTACCTGGCAGATTTCTACTGCACTTCTTCCAGTGGCACAAGTAAGGATGTAACTAAATTGTATAGCACCCATGAATCACTTTCCTGA 984 0.4278 MGFSVAASLGSHIVLRGTHETKIKCQLFYRTEQNSVGFKFSKHKAIQRAIFLTKQESIELDERKSANEVREEIKLCYELINRLGRGVVYLGSSRMGPGHSHYVQAQGLAKEARLRQWKVSSLEDMIIFSIHLAVQIANLLDCTTWSGAGPGLMDAVTQGAMLAGKPVGGFKIGKEAGEWTASNFHPYLPSENYLTCRFFSARKHGLVDAVVRNDSFDKTAVVALPGGIGTLDELFEIMALIQLERIGSKLPVPFLLMNYDSFYSKLLDFLNVCEDWGTVSKGEVASLWKVCNSNSEALAYLADFYCTSSSGTSKDVTKLYSTHESLS. 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02975 327 PANTHER EXPRESSED PROTEIN 271 316 - -
Seca6g02975 327 SUPERFAMILY MCP/YpsA-like 68 301 - -
Seca6g02975 327 Gene3D - 65 320 - -
Seca6g02975 327 Pfam Possible lysine decarboxylase 153 300 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02975 Seca-Chr6 95743944 95746514 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02975 - - gmx:100803538 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02975 6 95743944 95746514 Seca6g02975 6 95743944 95746514 ECH