Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02971 ATGGATTCCCCACAATCTGTTGTGTCACCCTTCAGGAGCTCAGTCTTGGGTGAGGGTGAGAAGCACAAGTCTGGTATCTCCAGTAAGGACATTGAAGTCAATGGGAAGGAAGCTGTCATGTCAAACATGGAGGAGTTCCTTGGAGTGCTTGACGTTTACATACATCAGGCCAGGGACATTCAAAACATCTGCATATACCACAAGCAAGATGTTTATGCAAAGATTTGCCTAACAAGTAATCCTAAGAACACTGTGTCTACCAAGACTATCAATGGAGGAGGAAGGAACCCTGTCTTTAATGAGAATCTTCGTCTCAATGTTTTGACTGTTGATTCTTCTCTCAAATGTGAGATATGGATGCTGAGCAGGGTGAAGAATTATCTTGAAGACCAGTTACTTGGTTTTGCTTTGGTACCTTTGTCTGAAGTACTAATCCAGAATGGGAAACTAGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTATTCCATTCTCCTGCAGGTTTTGTTCAGTTATCCCTTTCTTACTCTGGTGATTCACCTGATGTTATGGCAATTTCCAAAATGCCTACTGAGGTGGCCACAAATGTCACTGTGCAGGACTCAGAAACATCTGAGTCATTGGCCAGAGATTTGGATAAAATTGAGTTCCCGGATCCTAAGATTGTAAATGAAGACCACTTGATGGTTTCAGAATATTTTGGCATTCCATGTGAGGAGACTCAGTGTTCTGATAGCTTGGCCACTTCTGATGCTGAAAATCATAGTTCTGAAGCAGGTGTTCGTCTTGTGGAAAGCTTCTCAGCTTGTAGTGTTGAGTCTGTCCAACCCCCTAAGGTTGATTCTCCACCCAGCAGTGTGTCAACAAATGGGGTTTCTTCTTCTGTGCCTGAAAGTTCAGAATCATCTGATGCTGCTGCTTCTAAGTCTCCTGGTCAGGAACAAGTTTCAGTCACCAAAGAGGCAAAAAATGTGGATGTTAAAGATGGTGAGAGTGATTCCTCAAGTGGGGTTCCGAGTGACTCATTCCCTAAGCCTCTTGTGACTGTTAACATTGAGCCAGAACCAAAGGTGGTGCAGCAGGACATAGTAGACATGTACATGAAAAGCATGCAACAATTTACCGAGTCATTAGCAAAAATGAAGCTTCCTATGGACATTGAAAGTGAACCAACTAGTTCAGGAAATTCAACCACTGAGCAGAAACTACAACCATCTAAGAACAGTAACTCCCGTGTCTTTTATGGGAGCAGAGCTTTCTTCTGA 1263 0.4283 MDSPQSVVSPFRSSVLGEGEKHKSGISSKDIEVNGKEAVMSNMEEFLGVLDVYIHQARDIQNICIYHKQDVYAKICLTSNPKNTVSTKTINGGGRNPVFNENLRLNVLTVDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLIQNGKLEKEFSLSSTDLFHSPAGFVQLSLSYSGDSPDVMAISKMPTEVATNVTVQDSETSESLARDLDKIEFPDPKIVNEDHLMVSEYFGIPCEETQCSDSLATSDAENHSSEAGVRLVESFSACSVESVQPPKVDSPPSSVSTNGVSSSVPESSESSDAAASKSPGQEQVSVTKEAKNVDVKDGESDSSSGVPSDSFPKPLVTVNIEPEPKVVQQDIVDMYMKSMQQFTESLAKMKLPMDIESEPTSSGNSTTEQKLQPSKNSNSRVFYGSRAFF. 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02971 420 MobiDBLite consensus disorder prediction 273 348 - -
Seca6g02971 420 MobiDBLite consensus disorder prediction 384 420 - -
Seca6g02971 420 SMART C2_3c 49 152 IPR000008 -
Seca6g02971 420 MobiDBLite consensus disorder prediction 388 414 - -
Seca6g02971 420 PANTHER EXPRESSED PROTEIN 1 420 - -
Seca6g02971 420 Pfam C2 domain 48 154 IPR000008 -
Seca6g02971 420 MobiDBLite consensus disorder prediction 273 319 - -
Seca6g02971 420 CDD C2 50 156 - -
Seca6g02971 420 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 46 176 IPR035892 -
Seca6g02971 420 ProSiteProfiles C2 domain profile. 35 154 IPR000008 -
Seca6g02971 420 Gene3D C2 domain 44 207 IPR035892 -
Seca6g02971 420 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02971 Seca-Chr6 95658529 95661441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02971 - - gmx:100796499 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02971 6 95658529 95661441 Seca6g02971 6 95658529 95661441 ECH
Seca6g02971 6 95658529 95661441 Seca6g02971 6 95658529 95661441 PCT