Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02967 ATGGCTACGCTGAAGACGATCTCTGCGGCACTTAACCTCATCGACGCGAAGAAAGAGAATCTGAAGAAGGCCTTCGACGATCTCCAATCCCACTCTTCCTTACTCTCTTCCCTCCCTCTCTCATGGCTCGACCTCGATTCTCACTTCACCTCGCTCCAGCATTCCCTCACCCACCGCTTTCACCTCCTCCAATCCCTCGAACAATCACATTCCCAATCCCAATCCCAACCCGAAACCCTAACCCCTGACCCTATTGACCGAACCCCCAAAGGCGTGAACTTTACGGCGAACACTAACAACCCACCATCGAACCGGAACAGCGGGGTGTTCCCCCAAAACTATGTCGTTCCGGGCTCAGTTGTGCCCAGGTACGAGTTGAGCGTTCTGTGCGAGAAGATGGATGGCGTAGGGTTGAGGAATTACATTATGGACCACTTCAAGGATAGATTTAGGGTTCAGGCCGAGCTTCCCGGCGCGTTGCGCTGTGCACCGGACCCGGCCGAAATGGTTCTGGAATCGTTGGAAGGGTTTCATGGTGTGGATGGTGGTTCCAAGGATGGGGATATGAGGAAGTTGAGGAAGAGTTGCATTATATTGTTAAAGCAGTTGAGGGTTGCTGGTCTGAGTGTGAGTTCTAAGGCCAGGGAGAAAGCATTGAAGCTGGCTATGGAGTGGAAAGGGAGGTTGGTCGCTGATGGTGTCAATGCCAACACTCCGGTGGCATTAGGGTTTCTACATTTTGTTTCTGCCTTTGGTTTGGTTTCTGAATTCAGCATGGATGAGCTTGTTGATTTTTCTGTCGTAGCCGCATCTAACGAGGATTTCGTGGAGCTTTGCCGGGTCATTGGTTTGACAGATAGAGTTCCCGATATTGTTCAGAAACTTATAGATAGGGGCAAGCACATTCTGGCTGTCAAGTATGTTTTTGAGTTTAATCTTGCTGATAAGATTCCACCTGTTCCAATTCTGGAAGCTTGTGTGGATGAATCTAAGAAACTTGCTAAAAGACTTTCCCAGGAAGGAAAGCCAGTGGTAAGTGTGTCACCTTGA 1050 0.4952 MATLKTISAALNLIDAKKENLKKAFDDLQSHSSLLSSLPLSWLDLDSHFTSLQHSLTHRFHLLQSLEQSHSQSQSQPETLTPDPIDRTPKGVNFTANTNNPPSNRNSGVFPQNYVVPGSVVPRYELSVLCEKMDGVGLRNYIMDHFKDRFRVQAELPGALRCAPDPAEMVLESLEGFHGVDGGSKDGDMRKLRKSCIILLKQLRVAGLSVSSKAREKALKLAMEWKGRLVADGVNANTPVALGFLHFVSAFGLVSEFSMDELVDFSVVAASNEDFVELCRVIGLTDRVPDIVQKLIDRGKHILAVKYVFEFNLADKIPPVPILEACVDESKKLAKRLSQEGKPVVSVSP. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02967 349 MobiDBLite consensus disorder prediction 67 82 - -
Seca6g02967 349 Pfam Frigida-like protein 121 342 IPR012474 -
Seca6g02967 349 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 16 70 - -
Seca6g02967 349 MobiDBLite consensus disorder prediction 67 110 - -
Seca6g02967 349 MobiDBLite consensus disorder prediction 91 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02967 Seca-Chr6 95542298 95546329 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02967 - - gmx:102669439 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02967 6 95542298 95546329 Seca6g02967 6 95542298 95546329 ECH
Seca6g02967 6 95542298 95546329 Seca6g02967 6 95542298 95546329 PCT