Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02945 ATGAATGTGAATGTTCTGGCTCTAGGGCGCTCCCTCACTTCCCCTTTATATAAGACTTCTCCTTTCACTCAATCTCCAAATCAATTCAAACCCATCTTTCTTCTCTACCCAAAGTTCCTACCTTTGCACGCATCTCACCTTTTCTCTCTTGATTCTTCACCAATGGGCACTTGTGTTGATGCTTCCACCCTTCCTCTTTCCCGCAAACCAAACGGGTCCCAACCCGATGATTGTTCCTTCAACTACATGAAATTCTGCCGACCCAGTTTCTCTGATCGTGTTTCCTGCGTTCCCATTTGCAAGAATCGTGAAAAGCCCTTTCACACGCTCACGGTCGTGGAGGAATTGGAGCATCATGAGGTTGATCTGTGGCTGAGGATGCAAGAAGAGGCAAGGTTAGAAGTGGATCAAGAACCGATTTTGTCTAGCTACTATTTCAGCTCTATTTTGTCTCACAAATCGTTGGAAAGCGCTCTGGCGAATCACCTCTCCATCAATTTGAGCAGTTTGAGCCTTCCTAACAGTACCCTTTATGATATTTTCAAGGGTGTTTTGGTGGATGATCAAGATATCATAGATGCTGTGAAGGATGATCTGAGAGCAGTGAAGGAGAGAGACCCTGCTTGCATAAGCTATGTGCATTGTTTCTTGAATTTCAAAGGCTTTCTGGCATGCCAAGCTCATAGGGTGGCTCACAAATTGTGGTTACAGGGGAGGAAGGTTTTAGCAGTGTTGATTCAGAACAGGGTTTCTGAAGTTTTTGCTGTAGATATTCACCCAGGAGCCAAGATTGGACGTGGGATTTTGTTGGATCATGCAACTGGACTTGTTGTTGGGGAAACAGCTGTGATTGGGAATAATGTGTCAATTTTGCATAATGTGACATTGGGAGGAACAGGTAAGGTCTCAGGGGATAGACACCCAAAAATTGGTGATGGAGTGTTGATAGGTGCAGGGACTTGTATTTTGGGAAATATTAAGATTGGTGATGGAGCTAAGATTGGTGCTGGTTCTGTAGTGCTTAAAGATGTGCCACCAAGAACTACTGCAGTTGGAAACCCAGCTAAGTTGTTAGGAGGAAAGGATAACCCTACCAAATTGGATAAGATTCCTAGCTTTACCATGGACCAGACATCATACATACATGAGTGGTCTGATTATGTTATCTAG 1170 0.4402 MNVNVLALGRSLTSPLYKTSPFTQSPNQFKPIFLLYPKFLPLHASHLFSLDSSPMGTCVDASTLPLSRKPNGSQPDDCSFNYMKFCRPSFSDRVSCVPICKNREKPFHTLTVVEELEHHEVDLWLRMQEEARLEVDQEPILSSYYFSSILSHKSLESALANHLSINLSSLSLPNSTLYDIFKGVLVDDQDIIDAVKDDLRAVKERDPACISYVHCFLNFKGFLACQAHRVAHKLWLQGRKVLAVLIQNRVSEVFAVDIHPGAKIGRGILLDHATGLVVGETAVIGNNVSILHNVTLGGTGKVSGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAKLLGGKDNPTKLDKIPSFTMDQTSYIHEWSDYVI. 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02945 389 FunFam serine acetyltransferase 1, chloroplastic 107 256 - -
Seca6g02945 389 SUPERFAMILY Trimeric LpxA-like enzymes 121 359 IPR011004 -
Seca6g02945 389 Pfam Serine acetyltransferase, N-terminal 123 227 IPR010493 GO:0005737|GO:0006535|GO:0009001
Seca6g02945 389 FunFam Serine acetyltransferase 257 382 - -
Seca6g02945 389 Gene3D serine acetyltransferase, domain 1 109 256 IPR042122 -
Seca6g02945 389 PANTHER SERINE ACETYLTRANSFERASE 107 389 - -
Seca6g02945 389 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 316 344 IPR018357 GO:0016740
Seca6g02945 389 SMART SATase_N_2_a 123 227 IPR010493 GO:0005737|GO:0006535|GO:0009001
Seca6g02945 389 Pfam Bacterial transferase hexapeptide (six repeats) 307 341 IPR001451 -
Seca6g02945 389 Gene3D Hexapeptide repeat proteins 257 378 - -
Seca6g02945 389 NCBIfam serine O-acetyltransferase 195 356 IPR005881 GO:0005737|GO:0006535|GO:0009001
Seca6g02945 389 CDD LbH_SAT 254 354 IPR045304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02945 Seca-Chr6 95137223 95138392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02945 123 358 Miscellaneous Gene Families AT2G17640 58.475 4.15e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02945 K00640 - gmx:100779106 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02945 6 95137223 95138392 Seca6g02945 6 95137223 95138392 ECH
Seca6g02945 6 95137223 95138392 Seca6g02945 6 95137223 95138392 PCT