Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02930 ATGTCTCTTCGATCGCGAGCCCTTTCTTTCGCATCCAACCGTAATCTTCGACGCCTATTCTGCACCAATTCGGCTTCGGCTTCGGTTCAAACACCTCTCGCCGAGCCATCCGCCGCCACACCAAGCCGCTGGAACTTCCTCAAGTACGCCGTCGTCTGCGCACTCACCGGAACCGCCGCCGCTGCTAGTTACGCCACTTACGCTTACAGTTTGGATGAAATAGATGGAAAAACTAGGTCTTTCCGTGAGTCGGCAAAGTACAGTGCAGGTGATGGAGCCACTGCCCTCGATAAATTTCAAGGGTTGCTATACTCAACAGCAATGACAGTGCCTTCTAAAGCAATAGAGCTTTATTTGGATGCAAGAAGGCTAGTTGAAGAACAAATTCAAAGCTATACTGAACCATACACAGACAAGCTGCTTCCAGATTTGCTTCCTCAGGAGCAACATGTGTTTACACTTGTTCTGGATCTCAATGAGACACTGATTCACTATATCTGGACGCGAGATACAGGCTGGCAGACATTCAAAAGACCTGGTGTTGATGCTTTCTTGGAACATCTAGCTCAGTTTTTTGAAATTGTCGTGTATACTGATGAACAAAATATGTTTGTAGACCCTGTTTTAGATAGGCTTGATACCAAACATTGCATAAGATATAGGCTATCGAGACCTGCTACCAAATATCAGGATGGGAAACATTTCAGAGACCTTTCAAAGCTAAACAGAAATCCAGCAAAAGTTCTTTATTTAAGTGGCCATGCTATGGAAGGTTGCCTTCAACCTGAGAACTGTGTCCCTATTAAGCCATGGCAACAGCATGATATAGATGACACAGCTCTTTTGGATTTTATACCATTTCTTGAATTTGTTGCCCGTAGCAGCCCAGCTGATATAAGACCAGTGCTAGCATCTTACCAGGGATGTGAGATTCCAGCTGAATTTATTAAGCGTTCCAAGGATCACCAAAGGAGAATGCATGAACAGAAGCAGCGTGGTCGTTTCTGGAGAAATTGA 1017 0.4484 MSLRSRALSFASNRNLRRLFCTNSASASVQTPLAEPSAATPSRWNFLKYAVVCALTGTAAAASYATYAYSLDEIDGKTRSFRESAKYSAGDGATALDKFQGLLYSTAMTVPSKAIELYLDARRLVEEQIQSYTEPYTDKLLPDLLPQEQHVFTLVLDLNETLIHYIWTRDTGWQTFKRPGVDAFLEHLAQFFEIVVYTDEQNMFVDPVLDRLDTKHCIRYRLSRPATKYQDGKHFRDLSKLNRNPAKVLYLSGHAMEGCLQPENCVPIKPWQQHDIDDTALLDFIPFLEFVARSSPADIRPVLASYQGCEIPAEFIKRSKDHQRRMHEQKQRGRFWRN. 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02930 338 SUPERFAMILY HAD-like 139 304 IPR036412 -
Seca6g02930 338 FunFam Mitochondrial import inner membrane translocase subunit TIM50 138 321 - -
Seca6g02930 338 ProSiteProfiles FCP1 homology domain profile. 147 291 IPR004274 -
Seca6g02930 338 CDD HAD_FCP1-like 152 268 - -
Seca6g02930 338 PANTHER DULLARD PROTEIN PHOSPHATASE 83 316 - -
Seca6g02930 338 SMART forpap2 150 279 IPR004274 -
Seca6g02930 338 Pfam NLI interacting factor-like phosphatase 153 300 IPR004274 -
Seca6g02930 338 Gene3D - 137 321 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02930 Seca-Chr6 94985593 94992996 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02930 K17496 - gmx:100803155 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02930 6 94985593 94992996 Seca6g02930 6 94985593 94992996 ECH