Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02918 ATGAATGTGAAGAAGGACTTAGAAACTGATGCAGGAAAAGTCTTGGAGAATAATGGAATCAAAGAGTTGAAAGAAACTAATGTAAAAGAAATTGAAGAAGATAAAAAAGCTGATGGTGTGCAGGAGGTAGAAGAGGATAAGAAGGTTGGTTTTGTGGAAGAAGTAAAAGAGGATAAGAAAGATGATGAGGTGGAAGAAGTAAAAGAGGATAAGAAAGGTGATGGGTTGGAAGAAGTAGAAGAGGATAAGAAAGGTGATGGGGTGGAAGAAGTAGAAGAGGATAAGAGAGATGATGGGGTGGAAGAAGTAGAAGAGGATAAGAAAGATGATGGGTTGGAAGAAGTAAAAGAGCATACCGAAGTTGATGGTGTGGAAGAAGTAAAGGTGGATAAGGAAGTTGATAGTGTGAAAGAAGTTGTAGAGGATAAGAAAGATAATGACATAAAAGACATAGAAGAGGATGAGAAAGATGATAATGTATCTGTATCTGAGAAGAAGAAAATGGATGAAGATGCTGAGGTTAAGGAAACTACCGAAGTTAAAGAAGAAAAGGAAATAATTGAAGCCGAGAAACCAGAAGTGGATGTGATGGACGTAGAGGGTAGCATTAAGGAGGAGGAGGAGAGCAATGCAAAGGAGAAACTTGAAGCAGAGATGGAGGAGGAGGATGACGATGAGGATAATATTGACAAGTTAAAAGAAAAAGAGAAGGCAGAAGAGAGTAAGGGTGAGAAAGGATCAAAAAAGCATGGGAGAGGGAAGGTCAAAGGGGAGAAAGTGAAGGAGAAAAGAAAGGAACTGAAGAAAACAGAGCCAAGGACTCCTACTATTGATCGCCCTGTGCGAGAGAGGAAATCAGTTGAGAGGTTGGTAGCATCATTCGAGAGGGATGCAGCCAAAGAATTTCACATCGAAAAGGGTCGTGGTACACCTTTAAAAGATATACCCAATGCTAATAACTTTATGACTATTGCATTTTCTGCTGTAGTGGCATTTAAGTTATCTAGAAGAAAGACCGATGATTCTCTCAAATTGCTCCATACGATCCTCTTTGGAAGAAGAGGGAAGGCAGTTCAGATCAAGAGTAATATATCAAGGTTTTCTGGTTTTGTGTGGCATGAAAATGAGGAAAAGCAAATGATTAAAGTAAAAGAAAAATTGGACAAGTGTAACAAAGAGAAGTTACTGGAATTCTGCGATGTGCTTGACATAACACTTGCCAAGGCAACAACAAGGAAGGAAGATATTGTATCTAAGCTGATAGACTTTTTGGTTGCCCCTCATGCAACCACAACTGTGCTACTTGCAGAAAAAGAGAAGTCAAGTAAGGGAAAAAGGCGCAAGCGTGTTGTAAAACGCGGTTCATCAAGATCTGGGACAACAACTTCAAGACGGTCTGCTAAGAGACAGAAGAAAAATGAAGATTCTTCAGAATTGGAGAGAAAGAGTACAACTGACACAGAAGATGAGTCAGAGGAAGAAGAGAAAGACGAAGAAAATGAGGAGGAAAATGAAAATGGTGTTCCTGACAAATCTGAAGATGAAACACCAGACAAATCTGAAAGTGAAGATAAAAGTGATAATGGGAGTGAATCTGAAGATATGAAACAAATGAAGAAAACTTCTAAAACGTCATCTGCAAAGAAAGAATCTGCTGCAAAGAGTAAAATTGAGAAAATCACGGTCACAAATAAATCTCGCTCACCACGAAAAAGAACACCTAAGAAATCATCATCTACCCGCTCAAAGTCAGATGAAGATAGTGATGGAAGTCCAAAGGTCTTTTCAAGGAAGAAGAAAAATGAAAAAGGAGGAAAGCAGAAGATGGCTACTCCAACTAAGTCTTCCTCCAAAGAGAAAGCTGAAAAGGTTACTAAAGGAAAGGGCAAGAAGAAAGAGAAGTCGAGCCCCAGTGATGATCAGTTGCGTGATGCAATATGTGAAATTCTTAAAGAAGTTGACTTCAACACGGCCACATTTACTGACATTCTGAAGCTACTTGCCAAACAATTTGATATGGATCTCAACCCAAGGAAGGCATCTATAAAGGTTATGATTCAGGAAGAGCTGACAAAACTAGCTGATGAAGCAGATGAAGAAGAGGGAGAAGAGGATGCTGACAAAGATGAAGCCCCATCCACTGGCCAGGAGGTTGAAGCCTAA 2163 0.3962 MNVKKDLETDAGKVLENNGIKELKETNVKEIEEDKKADGVQEVEEDKKVGFVEEVKEDKKDDEVEEVKEDKKGDGLEEVEEDKKGDGVEEVEEDKRDDGVEEVEEDKKDDGLEEVKEHTEVDGVEEVKVDKEVDSVKEVVEDKKDNDIKDIEEDEKDDNVSVSEKKKMDEDAEVKETTEVKEEKEIIEAEKPEVDVMDVEGSIKEEEESNAKEKLEAEMEEEDDDEDNIDKLKEKEKAEESKGEKGSKKHGRGKVKGEKVKEKRKELKKTEPRTPTIDRPVRERKSVERLVASFERDAAKEFHIEKGRGTPLKDIPNANNFMTIAFSAVVAFKLSRRKTDDSLKLLHTILFGRRGKAVQIKSNISRFSGFVWHENEEKQMIKVKEKLDKCNKEKLLEFCDVLDITLAKATTRKEDIVSKLIDFLVAPHATTTVLLAEKEKSSKGKRRKRVVKRGSSRSGTTTSRRSAKRQKKNEDSSELERKSTTDTEDESEEEEKDEENEEENENGVPDKSEDETPDKSESEDKSDNGSESEDMKQMKKTSKTSSAKKESAAKSKIEKITVTNKSRSPRKRTPKKSSSTRSKSDEDSDGSPKVFSRKKKNEKGGKQKMATPTKSSSKEKAEKVTKGKGKKKEKSSPSDDQLRDAICEILKEVDFNTATFTDILKLLAKQFDMDLNPRKASIKVMIQEELTKLADEADEEEGEEDADKDEAPSTGQEVEA. 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02918 720 FunFam DEK domain-containing chromatin associated protein 628 692 - -
Seca6g02918 720 MobiDBLite consensus disorder prediction 613 642 - -
Seca6g02918 720 MobiDBLite consensus disorder prediction 259 276 - -
Seca6g02918 720 MobiDBLite consensus disorder prediction 83 108 - -
Seca6g02918 720 MobiDBLite consensus disorder prediction 467 486 - -
Seca6g02918 720 MobiDBLite consensus disorder prediction 578 598 - -
Seca6g02918 720 MobiDBLite consensus disorder prediction 694 708 - -
Seca6g02918 720 Gene3D - 629 692 - -
Seca6g02918 720 PANTHER DEK PROTEIN 160 706 IPR044198 GO:0003677|GO:0006325
Seca6g02918 720 MobiDBLite consensus disorder prediction 694 720 - -
Seca6g02918 720 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 636 691 IPR014876 -
Seca6g02918 720 MobiDBLite consensus disorder prediction 510 565 - -
Seca6g02918 720 MobiDBLite consensus disorder prediction 109 216 - -
Seca6g02918 720 MobiDBLite consensus disorder prediction 230 247 - -
Seca6g02918 720 MobiDBLite consensus disorder prediction 436 642 - -
Seca6g02918 720 MobiDBLite consensus disorder prediction 487 509 - -
Seca6g02918 720 SUPERFAMILY DEK C-terminal domain 631 690 - -
Seca6g02918 720 Coils Coil 373 393 - -
Seca6g02918 720 MobiDBLite consensus disorder prediction 54 82 - -
Seca6g02918 720 Coils Coil 203 242 - -
Seca6g02918 720 Coils Coil 683 703 - -
Seca6g02918 720 Coils Coil 484 504 - -
Seca6g02918 720 Pfam DEK C terminal domain 637 690 IPR014876 -
Seca6g02918 720 MobiDBLite consensus disorder prediction 54 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02918 Seca-Chr6 94800019 94807587 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02918 K17046 - gmx:100818537 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02918 6 94800019 94807587 Seca6g02918 6 94800019 94807587 ECH