Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02906 ATGTCTCTTGGGTATGCCGAGAAGCTTTCCTACATAGAAGATGTGGGCAACGTTGGAATGGCTGAATATTTCGACCCATCACACGTTTTGCGAGAAAAAATAGAGCGACTTGCTATCATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACAGGTGCAGGAATATCAACTTCTTGTGGTATACCTGATTTTCGAGGTCCCAAGGGAATTTGGACTCTTCAGCGTGAAGGTAAAGTCTTGCCTGAAGCATCATTGCCATTTCATCGTGCAGTGCCAAGCTTGACTCACATGGCTCTGGTTGAATTAGAAAAGACTGGTATTTTGAAGTTTGTTATCAGTCAGAATGTTGACGGTCTCCATCTTCGGTCTGGAATTCCAAGGGAGAAACTAGCCGAATTGCATGGGAATTCCTTCATGGAAACTTGCCCTTCTTGTGGAGCTGAGTACTTTCGTGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACATCAAGGCGCTGTTCAGATGCGACATGTGGAGCAAGACTTAAGGATACAGTCCTTGACTGGGAGGATGCATTGCCTCCAAAGGAAATGGATCCAGCTGAGAAGCACTGCAAACAGGCGGATATTGTGTTATGCTTGGGGACAAGTTTGCAAATAACTCCAGCATGCAACTTGCCTCTTAAAGCACTTCGTGGTGGAGGTAAAGTTGTCATTGTAAACCTCCAGAAAACTCCAAAGGATAAAAAGGCCAGTTTAGTCATACATGGCTTTGTTGATAAGGTAATTGCAGGTGTCATGGACCACCTTAATCTGCAGATTCCTCCATTTGTCAGGATTGATCTTTTCCAGATTATCCTAATGCAAGCTTTAAGCAATGGTAACCAGCATTCAATTGTAACTTTTAGCTATTCCTGGGGATGTACTTAA 912 0.4276 MSLGYAEKLSYIEDVGNVGMAEYFDPSHVLREKIERLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKVLPEASLPFHRAVPSLTHMALVELEKTGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGAEYFRDFEVETIGLKETSRRCSDATCGARLKDTVLDWEDALPPKEMDPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKKASLVIHGFVDKVIAGVMDHLNLQIPPFVRIDLFQIILMQALSNGNQHSIVTFSYSWGCT. 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02906 303 Gene3D - 135 184 - -
Seca6g02906 303 FunFam NAD-dependent protein deacetylase SRT1 135 184 - -
Seca6g02906 303 SUPERFAMILY DHS-like NAD/FAD-binding domain 5 292 IPR029035 -
Seca6g02906 303 Pfam Sir2 family 52 76 IPR003000 GO:0070403
Seca6g02906 303 Pfam Sir2 family 87 216 IPR003000 GO:0070403
Seca6g02906 303 PANTHER NAD-DEPENDENT HISTONE DEACETYLASE HST4 33 266 - -
Seca6g02906 303 Gene3D - 37 262 - -
Seca6g02906 303 FunFam NAD-dependent protein deacetylase sirtuin-6 isoform X2 36 134 - -
Seca6g02906 303 CDD SIRT7 45 251 - -
Seca6g02906 303 ProSiteProfiles Sirtuin catalytic domain profile. 27 267 IPR026590 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02906 Seca-Chr6 94461200 94475960 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02906 K11416 - gmx:100803586 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02906 6 94461200 94475960 Seca6g02906 6 94461200 94475960 ECH