Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02898 ATGGTAGCAAAAATCCGACAAACTGCTACTAGTTCTCCCAATCCAAAACCAGAGGTTGGAGAGATTGACACAAGCCCACCTTTTCAGTCTGTTAAAGATGCTGTTTCTCTGTTTGGGGAAGGTGCTTTCTCGGGTGAAAAGCCTATCCTTAAGAAGGCAAAACCTTATTCTGCTGAGAGAGTTTTGGCCAAGGAGACACAACTTCATGTAGCCCAGAAAGAGCTGAACAAGTTAAAGGAACAAGTAAAGAATGTCGAAATTACCAAGGCTCAAGCTCTTGTGGAGGTTGAAAGGGCTAAAAGGACAGTTGAGGATCTGACACAAAAGCTAAAAGTTATCAGTGAATCTAGGGAGTTAGCAATGAAGGCAACAGAATCTGCAAAAAGTCAGGCAAAACAACTTACAGAAGAAAAGTATGGCAATCCTGATGGATCAAATGGTGCTTGGAAAGAAGAGTTGGAAACTGCAGTTAAAAGGTATGCATCTGTCATGTCAGAACTTGATGCTGCAAAGCAAGAACTGAGGAAGGCTCGTCAGGAGTATGATTCATCCTTGGATGCGAAAATGTCTGCCTTCAAGCAAGTAGCAGAAGCTGAAGATGCAATGAAGGAGAACACAGAAAGAGCATCTGAGCTGTCCAAAGAAATTTCAGCTGCAAAGGAGTCAATTGAGCAAGTGAAGCTTGCATCTATTGAAGCACAGCAACATCAAGCAATGATATTAGCTGAGAAAGATGTTCTACGACAATCATATAAAGCTACCCTTGAACAATCTGAGAAGAAATTACTTGCTTTGAAGAAGGAGTTCAATCCTGAGCTCACCAAAAATCTCGAAGTGCAGTTGGCTGAGACAGTGAGTGAAATTGGGGCTCTGCAAAAGGAAATGGAAAATAAAAGGACGTCAGACTTGGACTCTGTAAAAAGTGTCACTTCAGAGCTTGATGATGCTAAGGAGTCACTGCAGAAAGTAGTAGATGAGGAAAACTCTCTCAGAAGCTTGGTGGAAACTCTTAAGGTGGAACTAGATAATCTAAAGAGAGAACATGCTGAATTGAAAGAGAAAGAATCTGAAACTGAATCCATTGTTGGGAATCTGCATGTCAAGCTCCGTAAAAGCAAGTCTGAGCTTGAATCCTGCTTAGCAGAAGAATCTAAAGTTAGAGGTGCATCTGAGGAAATGATCTTGACTCTGAGTCAGCTGACATCGGAAACTGAAAATGCACGGCGGGAAGCAGAAGATATGAAGAACAAGACAGCTGAATTGAAGAAGGAAGCTGAAGCTACCAAGCTTGCATTAGAGGATGCAGAGAAAAAGCTTAAGGTAGCACTGGAAGAAGCAGAAGCAGCAAAAGCAGCTGAAGCTAGTGCTCTTGATCAGATTACAGTGTTAACTGAAAGGACTACTGCTGCACGTGCATCGACATCTGAATCTGGTGCTGTGATTACAATCTCAAAGGAGGAGTTTGAGTCACTAAGTCGGAAAGTTGAGGAGTCTGATAAATTAGCAGACATGAAAGTGGCTGCTGCCAAGGCACAGGTTGAAGCTGTGAAGGCCAGTGAAAATGAGGCCCTCAAAAGGTTAGAGGCAACTCAGAAGGAGATTGAGGATATGAAGACTGCAACACAGGAGGCCTTGAAAAAGGCTGAGATGGCTGAAGCAGCAAAGAGGGCAGTGGAGAGTGAGCTTCGAAGGTGGCGCGAACGGGAGCAGAAGAAGGCAGCCGAAGCTGCATCTCGAATATTGGCTGAAACACAGGCGTCATTAGAATCATCTCCTCAGCACTATAGGATTCAAAAGCAGAATCCTCCTCATGCAACAATGGAGGTAAAGAAGTTTGAAAAGGAGAAGGTTTCAGTTTCAAAGAAAGCTCTCTTGCCTAATATTAGTGGTATCTTCCAGAGGAAGAAAAACCAGATTGAGGGTGGATCTCCTTCTTATCTGCCTGGTGAGAATCCTGTATGA 1962 0.4327 MVAKIRQTATSSPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPILKKAKPYSAERVLAKETQLHVAQKELNKLKEQVKNVEITKAQALVEVERAKRTVEDLTQKLKVISESRELAMKATESAKSQAKQLTEEKYGNPDGSNGAWKEELETAVKRYASVMSELDAAKQELRKARQEYDSSLDAKMSAFKQVAEAEDAMKENTERASELSKEISAAKESIEQVKLASIEAQQHQAMILAEKDVLRQSYKATLEQSEKKLLALKKEFNPELTKNLEVQLAETVSEIGALQKEMENKRTSDLDSVKSVTSELDDAKESLQKVVDEENSLRSLVETLKVELDNLKREHAELKEKESETESIVGNLHVKLRKSKSELESCLAEESKVRGASEEMILTLSQLTSETENARREAEDMKNKTAELKKEAEATKLALEDAEKKLKVALEEAEAAKAAEASALDQITVLTERTTAARASTSESGAVITISKEEFESLSRKVEESDKLADMKVAAAKAQVEAVKASENEALKRLEATQKEIEDMKTATQEALKKAEMAEAAKRAVESELRRWREREQKKAAEAASRILAETQASLESSPQHYRIQKQNPPHATMEVKKFEKEKVSVSKKALLPNISGIFQRKKNQIEGGSPSYLPGENPV. 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02898 653 Coils Coil 274 294 - -
Seca6g02898 653 MobiDBLite consensus disorder prediction 126 140 - -
Seca6g02898 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 20 625 - -
Seca6g02898 653 MobiDBLite consensus disorder prediction 585 600 - -
Seca6g02898 653 Coils Coil 248 268 - -
Seca6g02898 653 Pfam Weak chloroplast movement under blue light 21 571 IPR008545 -
Seca6g02898 653 Coils Coil 195 229 - -
Seca6g02898 653 Coils Coil 510 568 - -
Seca6g02898 653 Coils Coil 153 187 - -
Seca6g02898 653 MobiDBLite consensus disorder prediction 1 18 - -
Seca6g02898 653 Coils Coil 306 361 - -
Seca6g02898 653 MobiDBLite consensus disorder prediction 1 28 - -
Seca6g02898 653 MobiDBLite consensus disorder prediction 585 604 - -
Seca6g02898 653 Coils Coil 397 452 - -
Seca6g02898 653 Coils Coil 61 137 - -
Seca6g02898 653 MobiDBLite consensus disorder prediction 124 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02898 Seca-Chr6 94329100 94334072 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02898 - - gmx:100794569 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02898 6 94329100 94334072 Seca6g02898 6 94329100 94334072 ECH
Seca6g02898 6 94329100 94334072 Seca6g02898 6 94329100 94334072 PCT