Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02834 ATGCATCTCTACAATGCATGGCTGCCACCGCCGGTGGCCGCTCAGACCGCCGCCGAGAGAGAGTCTTTCGCTCGCATCATCGCCACCGTCAAGTCTTCCTTCCGTCACGACGATCCCGAATCTGTCTTCTCCACTCTCAAATACATCTCTGTCCTTGACCTTTTCATAAAGGCGAAAAGTGATGTATCTTTGGATGATATCCACACCCTTATTCAAATGGGCCTTGAATTATTTCACATGTCCCGAAATAAGCTTTATGCCCAGGTTAGGTGGGGAAATTTATTAGTCAGAGTACTCAACAAGTATAGGAAAAAGATTGCACTGGCTATTGAATGGAGGCCTCTGTATGATACGCTGATTAGCACACATTTTACTAGAAGTACAGGTCCAGAAGGTTGGAGAATAAGACAACGACATTTTGAAACTATCACTTCCCTTGTTCAGTCCTGCCGGAGATTTTTCCCATCAGGTTCTGCCTTTGAGATATGGTCTGAGTTTAAATCTTTATTGCAAAATCCGTGGCATAATTCTTCCTTTGAAGGATCTGGGTTCGCAAGACTTTTTCTCCCAACAAATCTGGACAATCAGGCCTTTTTTACACATGATTGGATAACAGAGTGCATAGACTTGTGGGGATCTATACCAAATTGCCAATTCTGGAACAGTCAATGGGCAGATGTTATAGCTCGTATTGTGAAAAATTACCACAATGTTGACTGGGAGTGCCTCTTGCCTTTGCTGTTTGCTAGATACTTGAATATGTTTGAGGCACGATTTTGGTTAGTCATTAGGGCCAATCCCACATCCCATGGTTGTACTTGTAAATCACAGGTTCCTGTTGCAAATGGAAGTGGATCATATCCTTATTCACTGGATGTTCCAAGAAACACAAGGTTCTTGTTCTCCAATAAAACTTCCACCCCTGCAAAAGCTATCGCAAAATCAATTGTATATTTACTTAAACCTGGTAGTTCATCACAACAGCACTTTGAGAAATTGGTCAACATTTTGGAACAATATTATCATCCCTCAAATGGTGGTCGATGGACTTACTCATTGGAGAGGTTTTTGTTTCATTTGGTGATTCAATTTCAGAAGCGTCTACAGAATGAACAGTTGGGCACACATAATAGCAAACCCACTGAACAGCATCTTGGGGAATCAGAGAGAGTTTTCTTTGTTAATTCAGTGCTAAAGTTAATTGATCGCGGTCAATACAGCAAGAATGAGCATCTCTCTGAGACAGTTGCTGCTGCAACTTCTATATTGTCCTATGTGGAACCCTCATTGGTTCTGCCTTTTGTGGCATCTCGTTTTCATATGGCCCTTGAGACGATGACTGCCACCCACCAATTGAAAATTGCAGTTATGTCAGTAGCATTTGTTGGGCGTTCACTGTTTTATACATCTGTATCAGCTTCCTCCATGAAACCAGTGGATCTTGGTGGTGGTGATGAAACATTTATTGATCTTGTGGGGGTTTCATTATCCAATGCATTACTTGGCATGGATGCTAACGACCCTCCAAAAACCTTGGCTACCATGCAATTAATTGGTTCCATTTTTTCAAATTTGGCTTTATTGGATGATAAAATTGATGACTTATCATTTATGCCGATGATCCGCTTTTCCGAATGGCTGGATGAGTTCTTATGCCGTCTGTTTTCCTTACTTCTACACTTGGAACCCAGCAGTGTTATAAATGAAGGTCTGCACTCATCAGCAGCATCAGGAACTTTTCTAGTTGATGATGGTCCATACTACTTCTGTGTGCTTGAAATTCTGCTTGGGAGGCTTTCAAAATCACTGTATAATCAGGCTTTGAAGAAAATTTCCAAGTTTGTGAGGACAAATATTCTTCCTGGTGCTATTGCAGAGGTTGGACTGCTCTGTTGTGCATGTGTTCACTCAAACCCAGAAGAAGCAGTTAGTCAACTTATTGAGCCAATATTAGTGTCTGTGATATCCTCTTTGAATGGAACACCACGCACTGGATTTGGAGGAAGAGGATCTTTTGACACTTCTGTATCAACCAAGGTTAGATCCACAATTTCACCGGCTCTTGAGGCTGCAATTGACTATCAACTAAAGATATTATCAGTTGGCATCACATATGGAGGTTCAGCTCTCCTCCGCTACAAGGATCAATTGAAAGAAGCCATCTTCTTGGCTTTTGACTCACCATCTTGGAAGGTTAATGGGGCTGCTGATCATCTTCTCCGGTCCCTTCTTGGAAGTCAGATTCATTATTATCCGATAGATCAATATAAGTGTGTTCTTAGCCACCCTGATGCTGTTGCTCTAGAAGAATGGATTAGCACGAAAGATTTTTCCACTGATGAAAAATTGATCCCAAAGTGGCATATTCCTTGTGATGAAGAAATTCACTTTGCAAATGAGCTTCTAGACATTCATTTTAAGTCAGCTTTGGATGATCTGTTGAAAATATGCCAAACTAAAATTCATGCTGATCAAGGAGATGAGAAAGAACATTTGAAAGTGACTCTTTTACGTATTGAATCAACATTGCAAGGACTTTTTTCTTGCTTGCCTGATTTTGTCCCAGACTCTAGGAATGGGATGGTTGAAGATTCAAAGCATACATTCCTAATTGCTGGGGCAACAGGTTGTACTGTTGGTAGCACTGCTCTGCGAGAAAAAGCTACTGAGATTGTACATGAAGCCTGCAAATATATCCTTGAGAAAAAATCAGATGATAGCATCCTGTTGATACTCATCATTCGAATTATTGATGCTTTAGGAAACTATGGAAGTTTGGAATATGATGAGTGGTGTAGTCACAGGCAGGCTTGGAAGTTGGAATCTGCTGCCATAATAGAACCTCCAATTAATTTCATTGTGTCATCTCATGCTAAAGCAAAGAAAAGACCTAGGTGGGCTCTTATCGACAAGGCATTCATGCACAATACCTGGAGGTCTTCACAAGCATCGTATCATCTTTACCGTACTAGTGGGAATTTCTGCCCATCTGATCATGTGACTATTTTGATGGATGATTTGTTGAGTCTCTCTTTGCATAGCTATGAAACTGTCCGCCTGCTTGCAGGGAAAGCTCTAGTGAAGCTGATAAAGAGATGGCCATCTACAATTTCAAAATGTGTTATCACTCTTACCAATAACTTACAAGATCCCAATGCCAAGGAATGTGCAGTGTTGGGTTCTTGCTCAGTCCTTGCCTCACAAACAGTTCTCAAGCATTTGACAACGGATCCAAAGTCATTCTCTTCATTTATCTTGGCAATTCTTTCAAGTTCTCATCATGAATCCTTGAAAGCTCAGAAAGCAATTAATGAGCTTTTCGTAAAGTACAACATCCAATTTTCTGGAGTATCTAAAAGCTTTTTCAGGATATCAGACAAAGACAATCATACTGGTGGTCTGGCTTTTTCAGATTTAGTTTCTCAGATTGGTTCCATGAGTTTTGATTCTACTGGCTTGCATTGGCGGTATAATTTGATGGCTAACAGAGTTCTTCTTCTGCTGGCTTTGGCGTCTCGGAACCACCCAAACTCATCATCTAAAATCCTGAGTGATACTGCAGGACACTTCTTGAAGAATTTAAAAAGTCAACTTCCACAGACAAGGATACTTGCAATTTCAGCTCTGAATACATTGTTAAAGGAATCACCTTATAAGCTGTCTCCTGGTGAGAAATCTGCTGTACACGAGGATTTACAAGGCAGTGTCAAATCATCCCTTGAAGGAACTTTAACTCAAACTTTTCAGGAAGAGGGTTTCTTCAATGAGACCCTCACTAGTCTTTCTCATGTTCATATAATAACTGATACTGAGTCTGCTTCAAGAGGAAATCAAGGAGATTCCAGTTTCCAAAGCTTAGCGGACAAATCCATAACCCGTTTTTATTTTGAATTTTCGGCTTCATGGCCACGCACGCCAAGTTGGATTTCCTTTTTAGGAAGTGATACATTCTACTCAAGTTTTGCTCGAATTTTCAAGCGGCTAGTACAAGAATGTGGCATGCCTGTAGTATTGTCTCTTAAAGGCGCAGTAGATGAGTTTACAAATGCCAAAGAGAGGTCTAAACAATGTGTAGCTGCTGAAGCATTGGCAGGTGTATTACATTCTGATATTGATGGTCTATCAGGAGCATGGGAAGGCTGGCTGATGCCCCAGTTGAAAAATATCATTTTAGCACAGTCTGTTGAATCAGTTCCTGAGTGGGCCTCTTGCATAAGATATGCAGTTACTGGTAAAGGAAAGTATGGAACAAGAGTTCCTCTTTTGAGGCAGAAAATTCTGGATTCTTTGATGACACCTTTACCTCCAACAGTAGCTACCACCGTAACAGCCAAGCGATATGCTTTTCTGGCTGCTGCACTTATAGAAATATGCCCGCAGAAAATGCCAGTAGCTGAAATCCAGCTCCACAATACACTTCTGAAGGAAGTTCTTGGTAATATGAGCCACTCATCAGCCCAAGTGAGGGAGGCTCTAGGGGTTACCCTGTCTGTATTGTGCTCTAACATTCGGCTATATCATTCAAGTCACCATGATAATGCGTTTGATGGGAGAAACAACAATGTTGATAATTTGATGAAAGATGAAAGCTGGGTTCAGTTTCTTACAGAGCGAGCAGCTGAAGCAGTTGTGAACATTCAGATTGCTACCCAATCAGATAAAGCGGCGAATCCCATGGATACGAGTTCTCAAAATGGGCATGTAGATGGTGATTCACAAGATGATATGAAATGGATGGAAACGCTACTCTACTTCATCATCTCATCATTGAAGTCCGGGAGATCCTCTTATCTACTTGACGTGATTGTGGGGCTTCTTTATCCTGTGATTTCCTTGCAGGAAACATCAAATAAGGATTTGTCGACATTAGCTAAGGCAGCATTTGAATTGCTGAAATGGATGATCGTTTGGGAACCTCACCTCCAGAAGGCCATATCTGTGATTCTTTCTGCTGCCAATGATTCCAACTGGCGAACTAGATCTGCTACATTGACATATCTGCGTACTTTCATGTACAGGCACACTTTCATTCTCTCAAGTTCAAAGAAACAAGAAATTTGGAGAACGGTTGAGAAGTTGCTAGTAGACAACCAAGTTGAGGTAAGAGAACATGCTGCAGCTGTTTTAGCAGGCTTAATGAAGGGTGGAGATGAAGATCTAGCTAAAGATTTCCGTGATAGAGCTTATACAGAGGCAAATGTTGTACACAAAAGAAGAAAATTGAGAAATGCAAGTTCTGGTTCATCTGTAGCATCTGTTCATGGTGCTGTACTAGCTTTAGCAGCTTCTGTATTATCAGCCCCATATGACATGCCCAGTTGGTTGCCTGAGCATGTTACACTACTAGCTCGCTTCAGTGGGGAGCCATCCCCTGTGAAATCTACAGTTACAAAAGCAGTTGCAGAGTTTCGGCGGACCCATGCTGATACATGGAATGTTCAAAAAGAGTTATTTACTGAAGAGCAACTTGAGATTCTGGCAGATACCTCCTCTTCATCATCATATTTTGCTTGA 5514 0.4126 MHLYNAWLPPPVAAQTAAERESFARIIATVKSSFRHDDPESVFSTLKYISVLDLFIKAKSDVSLDDIHTLIQMGLELFHMSRNKLYAQVRWGNLLVRVLNKYRKKIALAIEWRPLYDTLISTHFTRSTGPEGWRIRQRHFETITSLVQSCRRFFPSGSAFEIWSEFKSLLQNPWHNSSFEGSGFARLFLPTNLDNQAFFTHDWITECIDLWGSIPNCQFWNSQWADVIARIVKNYHNVDWECLLPLLFARYLNMFEARFWLVIRANPTSHGCTCKSQVPVANGSGSYPYSLDVPRNTRFLFSNKTSTPAKAIAKSIVYLLKPGSSSQQHFEKLVNILEQYYHPSNGGRWTYSLERFLFHLVIQFQKRLQNEQLGTHNSKPTEQHLGESERVFFVNSVLKLIDRGQYSKNEHLSETVAAATSILSYVEPSLVLPFVASRFHMALETMTATHQLKIAVMSVAFVGRSLFYTSVSASSMKPVDLGGGDETFIDLVGVSLSNALLGMDANDPPKTLATMQLIGSIFSNLALLDDKIDDLSFMPMIRFSEWLDEFLCRLFSLLLHLEPSSVINEGLHSSAASGTFLVDDGPYYFCVLEILLGRLSKSLYNQALKKISKFVRTNILPGAIAEVGLLCCACVHSNPEEAVSQLIEPILVSVISSLNGTPRTGFGGRGSFDTSVSTKVRSTISPALEAAIDYQLKILSVGITYGGSALLRYKDQLKEAIFLAFDSPSWKVNGAADHLLRSLLGSQIHYYPIDQYKCVLSHPDAVALEEWISTKDFSTDEKLIPKWHIPCDEEIHFANELLDIHFKSALDDLLKICQTKIHADQGDEKEHLKVTLLRIESTLQGLFSCLPDFVPDSRNGMVEDSKHTFLIAGATGCTVGSTALREKATEIVHEACKYILEKKSDDSILLILIIRIIDALGNYGSLEYDEWCSHRQAWKLESAAIIEPPINFIVSSHAKAKKRPRWALIDKAFMHNTWRSSQASYHLYRTSGNFCPSDHVTILMDDLLSLSLHSYETVRLLAGKALVKLIKRWPSTISKCVITLTNNLQDPNAKECAVLGSCSVLASQTVLKHLTTDPKSFSSFILAILSSSHHESLKAQKAINELFVKYNIQFSGVSKSFFRISDKDNHTGGLAFSDLVSQIGSMSFDSTGLHWRYNLMANRVLLLLALASRNHPNSSSKILSDTAGHFLKNLKSQLPQTRILAISALNTLLKESPYKLSPGEKSAVHEDLQGSVKSSLEGTLTQTFQEEGFFNETLTSLSHVHIITDTESASRGNQGDSSFQSLADKSITRFYFEFSASWPRTPSWISFLGSDTFYSSFARIFKRLVQECGMPVVLSLKGAVDEFTNAKERSKQCVAAEALAGVLHSDIDGLSGAWEGWLMPQLKNIILAQSVESVPEWASCIRYAVTGKGKYGTRVPLLRQKILDSLMTPLPPTVATTVTAKRYAFLAAALIEICPQKMPVAEIQLHNTLLKEVLGNMSHSSAQVREALGVTLSVLCSNIRLYHSSHHDNAFDGRNNNVDNLMKDESWVQFLTERAAEAVVNIQIATQSDKAANPMDTSSQNGHVDGDSQDDMKWMETLLYFIISSLKSGRSSYLLDVIVGLLYPVISLQETSNKDLSTLAKAAFELLKWMIVWEPHLQKAISVILSAANDSNWRTRSATLTYLRTFMYRHTFILSSSKKQEIWRTVEKLLVDNQVEVREHAAAVLAGLMKGGDEDLAKDFRDRAYTEANVVHKRRKLRNASSGSSVASVHGAVLALAASVLSAPYDMPSWLPEHVTLLARFSGEPSPVKSTVTKAVAEFRRTHADTWNVQKELFTEEQLEILADTSSSSSYFA. 1838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02834 1837 Gene3D - 1344 1770 IPR011989 -
Seca6g02834 1837 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 2 1837 IPR035309 GO:0016504|GO:0070577|GO:0070628
Seca6g02834 1837 Pfam Proteasome-substrate-size regulator, mid region 541 846 IPR032430 -
Seca6g02834 1837 Pfam Proteasome-substrate-size regulator, mid region 331 527 IPR032430 -
Seca6g02834 1837 SUPERFAMILY ARM repeat 906 1791 IPR016024 -
Seca6g02834 1837 Pfam Domain of unknown function (DUF3437) 1752 1837 IPR021843 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02834 Seca-Chr6 93539730 93559410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02834 K06699 - gmx:100814812 3270.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02834 6 93539730 93559410 Seca6g02834 6 93539730 93559410 ECH