Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02428 ATGCACATCACGATATCAGGGATATATGTTGGTGAGGGAATGGTAATCCACTTCACCAGAGGAGCAGGCCAAGAAATTGGAACAGGAACTGTCTTGGACCGTCTCCTTGTAAGTTTACCTCCCTCTCATTCCACTGACACTCCATGCCCAAGATGTGGTGACCAAACAAGGATTGATGGTGTCATCTCTTCATGCTTGGATTGTTTTCTTTCTGGAGGTGATCTTTATCTCTTTGAGTATGGTGTCTCACCTGCATTTTTTCTAGCCAAAGCTAGAGGAGGTACCTGCACCCTTGCCACTTCTGATCCAACTGAAGATGTCCTTCACCGTGCTTTGTTTCTTCTTGAAAATGGATTTGGGGGCTACAATGTCTTCAAGAATAACTGTGAAGACTTTGCAATTTACTGCAAAACAGGCCTGCTTGTAAATACAAACATCAGTGTTGGCAGGAGTGGGCAAGCAGCATCTTGTTTTGCTGCTGCTAGTGCTATAGTTTCTTCTCCACTCAGATTTATGACCACTAGTATTGGTGGTCTGTCATTGGTTGGTTGTGGCATGTATTGTGTTAGCAGATTGGTTTCTGATATTGGGGTGCGGCGTGATGTAACTAAAGTTCCAGTGGAAAAAATATCTGAGATGGCCAGGGAAGACTAG 654 0.4419 MHITISGIYVGEGMVIHFTRGAGQEIGTGTVLDRLLVSLPPSHSTDTPCPRCGDQTRIDGVISSCLDCFLSGGDLYLFEYGVSPAFFLAKARGGTCTLATSDPTEDVLHRALFLLENGFGGYNVFKNNCEDFAIYCKTGLLVNTNISVGRSGQAASCFAAASAIVSSPLRFMTTSIGGLSLVGCGMYCVSRLVSDIGVRRDVTKVPVEKISEMARED. 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02428 217 PANTHER OS05G0310600 PROTEIN 7 212 - -
Seca6g02428 217 Gene3D endopeptidase domain like (from Nostoc punctiforme) 3 146 - -
Seca6g02428 217 Pfam Lecithin retinol acyltransferase 7 141 IPR007053 -
Seca6g02428 217 ProSiteProfiles LRAT domain profile. 1 145 IPR007053 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02428 Seca-Chr6 87036647 87038096 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02428 - - gmx:100781683 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02428 6 87036647 87038096 Seca6g02428 6 87036647 87038096 ECH