Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02374 ATGGCAGAGAGTGATACGGTGCGTTTCGGCATCTTAGGCTGCGCCAATATCGCTAGGAAATTGGCTCGAGCCATTGCTCTGTCCCCTAACGCCATTCTCTCCGCCATCGCAAGCCGTTCCAAACAGAAGGCGGAGAAGTTCGCCGCCGAAAACGGTTTACCGGCGAGCGTGAGAGTTTACGGCAGCTACGATGAGGTGTTGGAGGACCCAAGTGTGGACGCGGTGTACATTCCCCTCCCCACGAGCTTGCACGTGCGGTGGGCGGTTACGGCTGCGAGCAAGAAGAAGCACGTGCTGGTGGAGAAGCCCGCGGCTGTTGACGTGGCGCAACTTGATCAGATCTTAGAAGCGTGCGAATCCAACGGCGTGCAGTTCATGGATGGTAGCATGTGGTTTCATCACCCTAGGACTGCCCACATGGAACACTTGCTTTCTCCTTCTCATTCCACCACTATTGGACCTGTTCAATTTATCCATAGCACATCAACAATGGCACCAACATCTGAATTCTTAGAGAACAACATTAGAGTAAAGCCAGAATTGGATGGCCTAGGTGCACTTGGTGACTTGGGCTGGTACTGTATTGGCGCTTCCTTGTGGGCAAAGGGCTACCAACTGCCAACAACCGTTACTGCTCTTCCTGACATCACCAGAAACGCTGCCGGAGTCATATTGTCGGTCACAGCCTCTTTGCAATGGAACCAACCAACCCAAACAGTTGCAAACATTCACTGCTCATTTCTTTCACACACGTCCATGGACCTTACCATATGCGGTTCCAATGGGTCTCTGCATCTCAAGGACTTCATAATCCCCTACCAAGAGACTGGTGCTTCCTTTGATTTCACATATGGTGCAAAGTTTGTTGACCTTCACATTGGGTGGAATGTGAGACCAGAGGAAGTTCATGTGGCCACTAAGCTCCCACAAGAAGTTCTGATGGTGCAAGAGTTTGCTAAGCTTGTTGCAAGTATTAGAGATTGTGGGTCTCGCCCCTCTACCAAATGGCCTGAAATTAGTAGAAAGACTCAACTGGTAGTTGATGCTGTGAACAAGTCCTTAGATCTTGGCTGTAAACCTGTTGCCTTGTAG 1092 0.5037 MAESDTVRFGILGCANIARKLARAIALSPNAILSAIASRSKQKAEKFAAENGLPASVRVYGSYDEVLEDPSVDAVYIPLPTSLHVRWAVTAASKKKHVLVEKPAAVDVAQLDQILEACESNGVQFMDGSMWFHHPRTAHMEHLLSPSHSTTIGPVQFIHSTSTMAPTSEFLENNIRVKPELDGLGALGDLGWYCIGASLWAKGYQLPTTVTALPDITRNAAGVILSVTASLQWNQPTQTVANIHCSFLSHTSMDLTICGSNGSLHLKDFIIPYQETGASFDFTYGAKFVDLHIGWNVRPEEVHVATKLPQEVLMVQEFAKLVASIRDCGSRPSTKWPEISRKTQLVVDAVNKSLDLGCKPVAL. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02374 363 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 148 323 - -
Seca6g02374 363 PANTHER - 5 362 - -
Seca6g02374 363 Pfam Oxidoreductase family, NAD-binding Rossmann fold 7 126 IPR000683 GO:0000166
Seca6g02374 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 160 IPR036291 -
Seca6g02374 363 Gene3D - 2 133 - -
Seca6g02374 363 Gene3D Dihydrodipicolinate Reductase; domain 2 134 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02374 Seca-Chr6 85872228 85874691 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02374 - - gmx:100785424 595.89