Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02353 ATGGAGGACAACAACGCAGAGCAAGAGAAGCGACTGACGCAGAAAGTCGCTGCAATTCTCGACGAGGCTCGAACCTCATACGCCACTCACAACCGAAAGCTCAAGGAATTATTCCTCCTCCGATCCAAATCCTCTTCCCCCTCACACTTCTTCTCCGCCTTCTCCAAAGCACTTATTCCCCTCTTTGACTTCCAGAGACGCCTCGCATCCGCCGAACGCGTCGTCTCCTTCGTCTCCACCTTCGCTGCCGCTCGCCACCCCAACGACGCTTCCATTTCCGACGAGTTCCTCGACCACTTCCTCAATTTCCTCCTCGCCGCCGCCGCCGCCGCCAACAAGACCGCTAGATTCCGAGCCTGCCAGATCGTTTCCGAGATAATATTGCGGCTGCCGGATGATGCAGAAGTGAGCAATGAGGTATGGGATGAGGTGATAGAAAGCATGAAGGTGAGGTTACGAGACAAGATCCCTGTGGTGCGTACTTTTGCGGTTAGAGCGCTTTCGCGCTTTGTGAATGACTCTGGGAACAGTGACATCCTTGATTTGTTCCTTGAGCTGCTTCCCCTGGAACAGAATGCGGACGTGCGTAAAATGATTGTGTTATCTTTGCCCCCTTCTAGTGCAACCTCTCAAGTTATCATTGATTGTACGTTGGACGTGAGTGAATCTGTACGCAAAGCAGCATACTGTGTTCTAGCTAATAAATTTCCTCTTCAAAGCTTAAGCATTAAGCTCAGAACATTAATTCTTCGGAGAGGACTTGCTGACCGATCCGTTGCTGTCTCAAAGGAATGTTTTAAACTATTGAAAGATGAATGGCTTATAAAGTCCTGTAATGGTGATCCTCTGGTGCTTTTGAAGTATCTTGATGTTGAAACCTATGAATCAGTGAGCGAGTCTGTCATGGAGGCACTCTTAAAAGCTGGTTTAGTGCAACTGCAGAATGATGCGAGTATCAGGCAGTATATATCATCAACATCAATTGGTGACACAACAGAAGGGGACTCAGTTCATTGCCCAACAAACATTGAACTGATGGAAGCAGAGGCTGCTCTTTATTGGAGAACTGTTTGCAAGTATTTGCAGTCAGAAGCACATGCCAAAGGCTCAGATGCTGCAGCCACTATGGGCACCGAGGCAGAAGTATATGCAGCAGAAGCATCAGATAAAAATGACCTTCTAGAAAAAATTCTTCCTGCAACAGTTGATGAATATATAGAGTTGGTCCGAGCTCATATCAATGCTGGATCAAACCATCGCTTTGCATGCCGTCAGCTGCTTTTGCTTGGCGGTATGTTTGATTTTTCTGATGCTACAAATAGAAAGGCTGCTAGTGCATTTCTGAAGGAGCTGATGAGCAAGCCTCCCGATCATGAGCTTGATAATGAAGGGAATGTTGTTGTCATTGGGGATGGATTAAGTTTTGGTGGAGACAATGAATGGGCTGAAGCTGTAGCCAGATTGGCAAGGAAAGTCCATGCTGCTGCTGGTGAATTTGAAGAAGTTGTTCTTGCAGTCATAGAAAAGCTAACTCAACCTTGCAGGGAGAGAACGGCAGATTATCTGCAGTGGATACACAGCCTTTCTCTAACTGGCCTTTTACTGAAAAGTGCAGTGTCATTACGCTTTCTTCAGGGCAAGGCTATTGAACCAGATGAACTACTTCAATCTTTACTACTTCCTGGGGCGAAACAATCTTACTTGGACGTGCAAAGGATTGCCATCAGATGTCTTGGTCTCTTTGGGCTTTTGGAGAGGAGACCAAATGCAGAACTTCTGAAACAGTTGAGGATTTCATATATTAAGGGGCCACATTTAATTAGTATAGAGGCCTCTAAAGCATTAATTGATCTCTTGATGTGGCATGGTCCTCAAGAAGTTGATGGGGTTTTGAAGCACGATATTCCATGCCAAATAAACTCTGATAAGAAGAGTTTTTGTCCTGTGAATTTCGCTGATTCAGAAGGGGATTTAAATGTTGAAATGCTTGATATCTTATATGGTGGCTTTGAAAACGATGACTGGGCTAGTCCCTTAACTAGCAATGAGGATGAATGCATTTATGATGTACTTGGAGAGGGGTTTGCGAAAATTCTTCTCCTAAGTGACAAATATCCAAGCATACCGGCTTCTTTGCATCCTGTGCTTTTATCTAAGCTCATTTACTTGTACTTCAGCGACGTGTCGGAACACCTGCACAGGTTGAAGCAATGCTTATCCGTTTTCTTTGAGCACTACCCATGTCTTTCAGTCAATCATAAGAGGTGCATATCGAAGGCTTTCATTCCAGTAATGCGTTCAATGTGGCCAGGAATTTTTGGCAATTCTGGGGGTTCTTCATTTATGGTGTCTCAGATGCGTAAGCGGGCTATTCAAGCTTCACGTTTTATGTTACAGATGGTGCAGATTCCTTTATACACTGAAGAGACTCAACCAGAGTGTGAAAAAACTAGTACAGAACATCCAGAAGTTATAGATAGTTGTGCTGAAGTTCCATTTGAGTGTGGTGAAGAGGGGCTTGCACTACGCATAGCCATAGAGGTAACCATCCTCAAATTTTAA 2562 0.4485 MEDNNAEQEKRLTQKVAAILDEARTSYATHNRKLKELFLLRSKSSSPSHFFSAFSKALIPLFDFQRRLASAERVVSFVSTFAAARHPNDASISDEFLDHFLNFLLAAAAAANKTARFRACQIVSEIILRLPDDAEVSNEVWDEVIESMKVRLRDKIPVVRTFAVRALSRFVNDSGNSDILDLFLELLPLEQNADVRKMIVLSLPPSSATSQVIIDCTLDVSESVRKAAYCVLANKFPLQSLSIKLRTLILRRGLADRSVAVSKECFKLLKDEWLIKSCNGDPLVLLKYLDVETYESVSESVMEALLKAGLVQLQNDASIRQYISSTSIGDTTEGDSVHCPTNIELMEAEAALYWRTVCKYLQSEAHAKGSDAAATMGTEAEVYAAEASDKNDLLEKILPATVDEYIELVRAHINAGSNHRFACRQLLLLGGMFDFSDATNRKAASAFLKELMSKPPDHELDNEGNVVVIGDGLSFGGDNEWAEAVARLARKVHAAAGEFEEVVLAVIEKLTQPCRERTADYLQWIHSLSLTGLLLKSAVSLRFLQGKAIEPDELLQSLLLPGAKQSYLDVQRIAIRCLGLFGLLERRPNAELLKQLRISYIKGPHLISIEASKALIDLLMWHGPQEVDGVLKHDIPCQINSDKKSFCPVNFADSEGDLNVEMLDILYGGFENDDWASPLTSNEDECIYDVLGEGFAKILLLSDKYPSIPASLHPVLLSKLIYLYFSDVSEHLHRLKQCLSVFFEHYPCLSVNHKRCISKAFIPVMRSMWPGIFGNSGGSSFMVSQMRKRAIQASRFMLQMVQIPLYTEETQPECEKTSTEHPEVIDSCAEVPFECGEEGLALRIAIEVTILKF. 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02353 853 FunFam ARM repeat superfamily protein 63 246 - -
Seca6g02353 853 Pfam Nuclear condensing complex subunits, C-term domain 528 848 IPR025977 -
Seca6g02353 853 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 2 849 IPR027165 GO:0000796|GO:0007076
Seca6g02353 853 SUPERFAMILY ARM repeat 49 747 IPR016024 -
Seca6g02353 853 Gene3D - 56 323 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02353 Seca-Chr6 85579361 85586069 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02353 K06678 - gmx:100817677 1387.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02353 6 85579361 85586069 Seca6g02353 6 85579361 85586069 ECH