Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02340 ATGTCCGTCTCATGTGGGGTGGAGTGTGTCGTCGTGCTCGGCTGCGCGCGCTGGCTGTGGAAACGCTGCACCTACATCGGCTCCTACGACAGTGCCACGTGGCCCTCAGCTACCGCCGGCGAGTTCGAACCGGTGCCACGTGTCTGCCGCCTCATCCTCGCTATCTACGAGCCCGATCTCCGCAACCCGCAGCACTACCAACCCGCCGGAGGGTACCGCCTGAACCCAGATTGGGTAGTGAAACGCGTCACGTACGAAGAGACTCTGGGCCACGCGCCGCCGTACATCATTTACGCCGACCACGATCACCGTGAGATCGTGATGGCGGTGCGGGGGTTGAACCTGGCGAAGGAGAGTGACTACAAGCTGCTATTGGATAACAAGTTGGGGATGCAGATGTTTGATGGTGGTTATGTTCATCATGGTTTGTTGAAATCGGCGGTGTGGTTGCTGAACCGGGAATCGGAGACTCTGAAGAGGTTGTGGGTGGAGAATGGTTCGGAGTATAAGATGGTGTTTGCAGGGCACTCTTTGGGGTCTGGTGTGGTGTCCTTGTTGACCATTCTTGTGATCAATCAAAGGGAACGTTTGGGTGGAATTCCCAAAGAGAAGATTCAATGTTATGCCATTGCTCCTGCTAGGTGTATGTCCCTCAATTTGGCCGTCAAATATGCCAATGTCATACATTCTATTGTGTTGCAGATTTTAATCTTTTATTTATTGGTGCAGGATGATTTCTTGCCAAGAACGGCTACTCCACTGGAAGATATATTCAAATCAATATTCTGCTTGCCCTGCTTATTATTCTTGGTTTGCTTGAGGGACACCTTCATACCTGAAGGTCGAAAGCTACGAGATCCAAGGAGACTTTATGCACCTGGACGAATGTATCATATTGTGGAGAGAAAATTTTGCAGATGTGGGAGATTTCCTCCTGAAGTGAGGACTGCTATTCCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGTAATGCAACATCAGATCATGGAATTATTTGGATTGAAAGGGAAGCAGATAAAGCCTTACAATTGATGAAGGATGATGACTCCAAAACTGTGACAGTCCCTCCAACAGTACAAAAGTTTGAGAGGTTGAAGACCATAGAAAAAGAACATAAAGATGCTTTAGAAAGAGCTGTGAGCTTAAATGTGCCTCATGCAGTGGACACTGCAGAGAAAGAACCATCTGAGAACAATGAAGGTGAAGCATCAAGTAGTGGGGGCAAAGAATCCGCCTCAAGTACTCAATCAAAATCAAGTGGTGGAAGGTCAAACTGGGATGAGGTTGTTGAAAAGCTCTTAAGGAAGAATGAGACAGGAGATAAACACCTGGAAAAGGATACAAGTGTCTCACAATAA 1383 0.4765 MSVSCGVECVVVLGCARWLWKRCTYIGSYDSATWPSATAGEFEPVPRVCRLILAIYEPDLRNPQHYQPAGGYRLNPDWVVKRVTYEETLGHAPPYIIYADHDHREIVMAVRGLNLAKESDYKLLLDNKLGMQMFDGGYVHHGLLKSAVWLLNRESETLKRLWVENGSEYKMVFAGHSLGSGVVSLLTILVINQRERLGGIPKEKIQCYAIAPARCMSLNLAVKYANVIHSIVLQILIFYLLVQDDFLPRTATPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHGIIWIEREADKALQLMKDDDSKTVTVPPTVQKFERLKTIEKEHKDALERAVSLNVPHAVDTAEKEPSENNEGEASSSGGKESASSTQSKSSGGRSNWDEVVEKLLRKNETGDKHLEKDTSVSQ. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02340 460 SUPERFAMILY alpha/beta-Hydrolases 40 251 IPR029058 -
Seca6g02340 460 MobiDBLite consensus disorder prediction 436 460 - -
Seca6g02340 460 MobiDBLite consensus disorder prediction 408 432 - -
Seca6g02340 460 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 455 - -
Seca6g02340 460 Pfam Lipase 3 N-terminal region 7 65 IPR005592 GO:0016042
Seca6g02340 460 MobiDBLite consensus disorder prediction 385 460 - -
Seca6g02340 460 CDD Lipase_3 41 249 - -
Seca6g02340 460 Gene3D alpha/beta hydrolase 36 256 IPR029058 -
Seca6g02340 460 Pfam Lipase (class 3) 107 251 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02340 Seca-Chr6 85374754 85378599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02340 1 352 Miscellaneous Gene Families AT5G37710 74.148 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02340 - - gmx:100798831 758.444