Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02325 ATGATGGAAATAAGTATTGCTAGGTGTCGTCTCGAAACACAAGGGATATTCTTTTCCAATATTTCCAGAACAATAGGATGGGAAAACACTCAGAAACTTCCATATAATGTAGCTGCCCTGAATTCAAGATGGGACTTTCACAGATTGGCCTCTTCCTACCAAGCTTTTACTGCAGTGCATCCAAGAAGGCCTTCTTTCTGTAGAACACATTCTATGCCAATTAGTTTAGAGGAATCTGCATCATTACAATCTGAAGATAATTCTAGTGAGGATGTGGATCCATCTACAGACTCAGAAGAGGAGATTTTAGAAAAACCACTAACCAGTGAGCAGGTAATGGCACTGCTTGCTGATACTGAAAGAGCAAAACTCACTAAGAAGCTTAGTGAAGCCAACCAGCAAAATCGGTTCCTCAAAAGACAGTTGTATATAAAGGAGGATGCATTGGTAAAATTTAAAAGTGAACTTGCTGTCATGGAGCTTGAAGTTCAGGCTTTGGCCAGACTAGCAGAAGAAATAGCTCAGTCTGGTATTCCAGAAGGTTCAAGGAAGATCAATGGAAAGTACATCCATTCTCACCTTGTTGCTAGATTAGAAGCTGTACATGAACAATTGAAGGAACAAATAAAGGATGTTGATGCGGCACAATCAAAGGAGGTCTCTGTGTTTTGGTTTGGCATGGCTGAGAGCGTGCAAGTTATGGGCACCTTTGATGGTTGGAGCCAAGGAGAGCACCTTTCACCTGAGTATACTGGTTCTTACACAAGGTTCTCAACAACATTGATGCTCAGGCCAGGAAGGTATGAAATCAAATTCTTAGTAGATGGTGAGTGGCAGCTATCACCAGAGTTCCCCGTTACTGGTGAAGGGTTAACCAAAAATAATTTGTTAATTGTTGAGTGA 903 0.412 MMEISIARCRLETQGIFFSNISRTIGWENTQKLPYNVAALNSRWDFHRLASSYQAFTAVHPRRPSFCRTHSMPISLEESASLQSEDNSSEDVDPSTDSEEEILEKPLTSEQVMALLADTERAKLTKKLSEANQQNRFLKRQLYIKEDALVKFKSELAVMELEVQALARLAEEIAQSGIPEGSRKINGKYIHSHLVARLEAVHEQLKEQIKDVDAAQSKEVSVFWFGMAESVQVMGTFDGWSQGEHLSPEYTGSYTRFSTTLMLRPGRYEIKFLVDGEWQLSPEFPVTGEGLTKNNLLIVE. 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02325 300 Coils Coil 121 141 - -
Seca6g02325 300 CDD E_set_AMPKbeta_like_N 219 299 - -
Seca6g02325 300 MobiDBLite consensus disorder prediction 78 101 - -
Seca6g02325 300 FunFam Protein PTST, chloroplastic 212 300 - -
Seca6g02325 300 Coils Coil 195 218 - -
Seca6g02325 300 SUPERFAMILY E set domains 220 299 IPR014756 -
Seca6g02325 300 Pfam Glycogen recognition site of AMP-activated protein kinase 221 296 IPR032640 -
Seca6g02325 300 Gene3D Immunoglobulins 210 299 IPR013783 -
Seca6g02325 300 PANTHER PROTEIN PTST, CHLOROPLASTIC 5 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02325 Seca-Chr6 85114774 85120177 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02325 - - gmx:100806282 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02325 6 85114774 85120177 Seca6g02325 6 85114774 85120177 ECH