Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02305 ATGGGTGTAGTGAGGGGGGTGATATTGGATGAATCAGTACTCTTGGCTGAATGTGATGATGATAAAAACGTATCTTCACTACGGGAAGGAGCTGAGTCTCTCATCCGAACACTCTTCCTGTCCAGAACCCATATGGGAATTGCTTATGGTGTGGGCCTTTCTGATGACAAGGTGGGTATTCTGAAAAGAATTGCTAGTTTATACTCACTTGATTGCTTTATCTTAAATGATCCTGGAAGTGAGGTTATGCCTGGATGGATTAATACCGATGATGGCACTATTGTTTATCTTGTTTCTAACAAGGCAGAGTTCTTACCTAAACTAAGCAGCTATGAATGGCTTATTGTTGTTCTGAATGTTGGCGGGGAAAGTTCATGTGACACTCCAAATATGCTTCAGATTGAAAATTTGGAAGAGTTGCCATTAACCATATGCAACTTAAATAAAAGGTCAATTGGAATCAATGCTGTGACTGTGGGTTATGTAATGAAGCCTTCTCGTGTGGAAGATTTTGCAAAGAGGGGTGCATTCCCGTTGTGTCCTACACAAAATGGCTTGATGTTTGTGCCTCTTACATCCAAGCTGCCTTTATCATCTCAATTAAAGGATGTTGACATAGTACTCCATAAAGCCACTGATGAAATATTATCTATTGAAGAGAATAAACTTACCTTCACACAGAACATGCAAGAACTGCAAAGATATTTGGATCAACACCAGGATTGCTGTGTGATTGACCCACTGAGTAACATTTATCCTTTATTGGATCGGCTAGAAATTCAACAAGTTCTACTTGGCTTGGTAGAACTAAATACTGAACGCAGCTATTTAATCAGAGGGCCGCATTTTCTTAAGGTTGATAATTTTGACGAATTTAATTTTGCGACTGGATTAGCTGAAGCTAGATTGTCTCTTCCATGTATAGTGAAACCCAAAGTTGCTTGTGGTGTCAGTGATGCTCATAAGATGGCAATTGTTTTCAGAGTTGATGATTTTAAGAATTTAAGTGTTCCTCTTCCAGCTGTTATTCAGGAATACGTGGATCATTCATCCACTTTATACAAGTTTTATGTCTTGGGTGAAAAAGTTTTCTATACTGTCAAGAAGTCAATACCAAATGCTGATATTTTGATGAAATTATCCAATGGTGATGACTTCAAACCTCTTGAGTTTGATAGCTTAAAATCTCTACCCACTGCAGACAGCATCAAGGATTCTGGAGACAGTAATGAGTCTATTGACCTTAAGCTGGTTACAGATGCTGCAAACTGGCTTAGGAGAAGGCTTCATCTCACTGTGTTTGGTTTTGATGTTGTGATTCAGGAAGGAACTTGTGATCATGTAATTGTGGATGTAAACTATCTTCCATCCTTTAAGGAAGTACCTGATGACATCTCTATTCCTGCTTTCTGGGAGGCCATTAGAAATAAGTTTGACTGTAAGATGTCTAAATAA 1455 0.3863 MGVVRGVILDESVLLAECDDDKNVSSLREGAESLIRTLFLSRTHMGIAYGVGLSDDKVGILKRIASLYSLDCFILNDPGSEVMPGWINTDDGTIVYLVSNKAEFLPKLSSYEWLIVVLNVGGESSCDTPNMLQIENLEELPLTICNLNKRSIGINAVTVGYVMKPSRVEDFAKRGAFPLCPTQNGLMFVPLTSKLPLSSQLKDVDIVLHKATDEILSIEENKLTFTQNMQELQRYLDQHQDCCVIDPLSNIYPLLDRLEIQQVLLGLVELNTERSYLIRGPHFLKVDNFDEFNFATGLAEARLSLPCIVKPKVACGVSDAHKMAIVFRVDDFKNLSVPLPAVIQEYVDHSSTLYKFYVLGEKVFYTVKKSIPNADILMKLSNGDDFKPLEFDSLKSLPTADSIKDSGDSNESIDLKLVTDAANWLRRRLHLTVFGFDVVIQEGTCDHVIVDVNYLPSFKEVPDDISIPAFWEAIRNKFDCKMSK. 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02305 484 PIRSF ITPK_unchar_domain 1 484 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Seca6g02305 484 FunFam Inositol-tetrakisphosphate 1-kinase 4 247 457 - -
Seca6g02305 484 FunFam inositol 1,3,4-trisphosphate 5/6-kinase 4 isoform X2 288 386 - -
Seca6g02305 484 Gene3D - 146 271 - -
Seca6g02305 484 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 281 463 IPR040464 -
Seca6g02305 484 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 156 477 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Seca6g02305 484 Coils Coil 480 484 - -
Seca6g02305 484 FunFam Inositol 1,3,4-trisphosphate 5/6-kinase 4 145 270 - -
Seca6g02305 484 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 159 251 IPR041429 -
Seca6g02305 484 Gene3D - 288 387 - -
Seca6g02305 484 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 301 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02305 Seca-Chr6 84519072 84520526 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02305 K01765 - gmx:100810742 823.928