Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02267 ATGAATCATCCAGCTTCTTCATCAAGTTCGTTCGTGGATCCAGACTCACTCAACAACAACAAAACAGAAAATTCTTTCTCTTGGACTAGAAGACAATACAAACAATTTGAAAAAGCACTGGTCTTATATGATGAAAACACCCCAGATAGATGGCAGAAAATAGCAAAATTTATTGATGAGAAATCTGTGGCGGAAGTAAAGAGACATTATGCTGATTTATTAGAAGATATCAATAATATAGAAAGTGGACTTGTTCCTATTCCCAACTATAGAACAACAAAGACTCACAGATTGTGTGAAGATATGAGGTAA 312 0.3462 MNHPASSSSSFVDPDSLNNNKTENSFSWTRRQYKQFEKALVLYDENTPDRWQKIAKFIDEKSVAEVKRHYADLLEDINNIESGLVPIPNYRTTKTHRLCEDMR. 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02267 103 CDD SANT 27 70 IPR001005 -
Seca6g02267 103 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 20 95 IPR044636 GO:0003700
Seca6g02267 103 Gene3D - 20 87 - -
Seca6g02267 103 FunFam Transcription factor SRM1 20 87 - -
Seca6g02267 103 SMART sant 24 76 IPR001005 -
Seca6g02267 103 MobiDBLite consensus disorder prediction 1 24 - -
Seca6g02267 103 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02267 Seca-Chr6 83819288 83819599 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02267 - - gmx:100788168 109.768