Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02249 ATGGGACGCCTAAAGCTGCAAGCTGGTATCAATGCAATAGAGGAGGAGGAACCTGAGGAGTGTGATGCTTCCTATCCTAACAAAACAACTTTAGCGTGCATGATCAATTCAGAGATTGGTGCTGTTTTGGCAGTCATGAGAAGAAATGTAAGATGGGGAGGTCGTTATATGTCAGGCGATGATCAGCTGGAACACACTCTCATTCAATCCTTCAAGGCATTAAAGAGACAGATCTTTTCGTGGCACCACCATCAGTGGCAAGCTATCAACCCTGCCTTGTATCTACAGCCATTTTTAGATGTGATTCAGTCTGATGAAACCGGTGCACCAATTACTGGCGTTGCTTTGTCATCCGTTTACAAGATCCTAACTCTTGATGTGATTGATCAAAATACTGTCAATGTTGAGGATGCCATGCACTTGGTGGTTGATGCTGTCACTAGCTGCAGATTTGAGGTCACTGATCCTTCTTCGGAAGAAGTTGTTTTAATGAAGATACTACAAGTTCTCCTAGCATGTATGAAAAGTAAAGCATCTGTAATGCTGAGTAACCAGCATGTTTGCACCATAGTGAATACTTGTTTCCGTATAGTTCATCAATCGGGAGGCAAGGGTGAGTTGTTGCAGCAGATAGCACGGTACACAATGAATGAACTTGTAAGGTGTATTTTCTCTCACCTTCAAGATGTTGACAACATGGACCATGCATTGGTTAATGGAAGCTCTAATTTGAAACAGGAGCAGACTGGAAGCCTAAATAGTGAGTATGCTTTTGGAAGCAGACAATTGGAGAATGGCAGCATGAGTTCTGAATATGATAATCAGCCATTACCCACAAACTTTGCTCCCAATGCTGCAAATGTTGTGACAGCAACTGTGATGGACGAAAACACAGCAATAGCTATTAGTGGCAAGGATGGCGTATCTTATGGCACGCATCTCATGACTGAACCATATGGCGTTCCTTGCATGGTGGAAGTATTTCACTTTTTTTGTTCTTTGCTGAATGTTATTGAGCATACAGAAATGGGTCCTAGATCAAACACTATAGCATTTGATGAAGATGTACCCCTCTTTGCTTTAACTTTAATTAATTCGGCTGTAGAACTTGGAGGGCCTTCTATTCGCCGTCACCCAAGGTTGCTGAGTTTAATTCAGGATGAATTATTTCATAATTTGATGCAATTTGGTTTGTCAATGAGTCCTCTTATACTCTCAATGGTGTGTAGCATTGTTCTCAATCTGTATCATCATCTTCGTACAGAACTCAAACTACAGATAGAAGCATTTTTTTCTTGTGTAATTTTGAGACTTGCACAAAGCAGATATGGGGCTTCATACCAGCAGCAAGAGGTAGCCATGGAGGCCCTTGTTGACTTCTGCAGGCAAAAGACATTTATGGTAGATATGTATGCTAATTTTGACTGTGACATAACTTGCAGTAATGTCTTTGAAGATCTTGCTAATTTGTTGTCCAGAAGTGCATTTCCTGTGAACTGTCCATTGTCTACCATGCATATTCTTGCTTTGGATGGTCTTATTGCTGTTATTCAGGGAATGGCCGAAAGGATAGCCAATGGATCGGTAAGCTCAGAATATTCTCCAGTGAATCTTGAAGAGTATACTCCATTCTGGATGGTAAAATGTGAGAATTATAGTGATCCAAATCATTGGGTTCCCTTTGCCCGCCGAAGAAAGTACATAAAGAGAAGATTGATGATTGGTGCTGACCATTTTAATCGTGATCCTAAGAAAGGTCTAGAGTTTCTCCAAGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCTTGCTTTTTCAGATACACTGCTGGGTTGGATAAGAATCTTGTTGGTGATTTCTTAGGAAATCATGATGAATTCTGTGTTCAGGTTCTTCATGAATTTGCTGGAACATTTGATTTCCAAGACATGAACTTAGACACAGCCCTGCGTCTATTTTTGGAGACTTTCAGATTGCCTGGTGAATCACAAAAGATACATAGGGTGCTTGAAGCTTTTTCTGAGAGATACTATGAGCAGTCACCACATATCCTAGCTAACAAGGATGCTGCTCTTGTGTTATCATACTCAATGATAATGCTTAATACTGATCAGCACAATGTGCAGGTTAAAAAGAAGATGACTGAAGATGATTTTATCCGCAATAATAGGCATATAAATGGTGGCAATGATCTTCCTAGAGAATTCCTGTCAGAGATATACCATTCAATTTGTAAGAATGAAATACGCACGACCCCGGAACAAGGTGTTGGATTTCCTGAAATGACACCAAGTCGATGGATTGATCTAATGCATAAGTCCAAAAAAACTGCTCCATTTATTGTGTCTGATTCCAAGGCCTACCTTGATCATGATATGTTTGCCATAATGTCAGGCCCTACGATTGCTGCCATTTCTGTGGTATTTGATCACGCTGAGCATGAAGATGTATACCAAACATGTATGGATGGATTCCTAGCTATTGCTAAGATTTCAGCTTGCCATCATCTTGAAGATGTTCTTGATGATCTGGTAGTTTCTCTTTGCAAGTTCACTACGCTTTTAAACCCGTCATCAGTTGAGGAACCAGTCCTTGCCTTTGGAGATGACATGAAAGCAAGAATGGCAACTGTAACAGTATTCACTATTGCAAATAGATATGGTGATTACATACGCACAGGTTGGAGAAATATTCTTGATTGCATCTTAAGACTGCACAAGCTAGGTCTTCTTCCTGCCCGTGTTGCCAGTGATGCAGCTGATGAGTCAGAGCTTTCTGCTGAAACTGTGCATGGAAAGCCTATTATGAATTCTTTATCCTCAGCTCATATGCAATCCATTGGCACTCCAAGGAGATCCTCAGGATTGATGGGTAGGTTTAGTCAACTATTATCTCTTGACACTGAGGAGCCAAGATCACAACCTACTGAACAACAACTTGCTGCTCATCAGCGCACCCTTCAAACAATACAAAAGTGTCACATTGACAGCATATTCACTGAGAGTAAATTTCTGCAAGCTGAATCTCTATTGCAGCTTGCAAGAGCACTCATTTGGGCTGCAGGGAGACCTCAAAAAGGGAACAGCACACCTGAGGATGAAGATACAGCAGTTTTCTGCCTGGAGTTGCTCATTGCAATCACTTTGAATAATAGGGATAGAATTGGGATTCTTTGGCAGGGTGTGTACGAGCACATATCCAATATTGTTCAGTCAACTGTAATGCCCTGTGCCCTGGTAGAGAAGGCTGTTTTTGGACTCTTGCGAATTTGCCAGCGGCTGCTCCCCTACAAGGAGAACATTGCTGATGAACTTCTGAGATCACTGCAACTTGTCTTGAAGCTTGATGCCCGGGTTGCCGATGCATACTGTGAGCAGATTACTCAGGAAGTCAGTCGCCTTGTGAAGGCAAATGCTTCTCACATAAGATCTCCATTAGGATGGCGAACAATTACATCACTACTTTCCATCACAGCTAGGCACATAGAAGCATCTGAGGCAGGGTTTGATGCACTATTGTTCATAATGTCTGATGGTGCCCACTTGCTTCCAGCTAATTATGTTCTCTGTGTAGATACTGCAAGGCAGTTTGCTGAGTCTCGTGTTGGACAAGCAGAGCGATCTGTACGGGCACTAGATCTCATGGCAGGGTCTGTCAATTGCTTGGCCCAATGGACTACTGAGGCTAAGGAAGCAATGGAGGAGGAGCAAATTTCTAAGTTGTCTCAGGATATCGGAGAGATGTGGTTAAGACTAGTACAGGGTCTGAGGAAGGTGTGTTTAGACCAGAGAGAAGAGGTTAGAAATCATGCTTTATTGTCTCTGCAGAGGTGCTTGACAGGAGCTGATGGCATTTATCTCCCATATAGTTTGTGGTTACAGTGTTTCGATCTTGTGATCTTCACTGTGCTTGATGACCTGCTTGAGATTGCACAGGGACACTCTCAAAAGGACTACCGCAATATGGAAGGCACCCTTATCTTAGCAATGAAGCTCTTGTCAAAAGTTTTTCTTCAATTACTCCCAGATTTATCACAATTGACAACCTTCTGCAAGCTATGGTTAGGTGTACTGAGCAGAATGGAAAAATATATGAAGGTGAAGGTTAGGGGGAAAAGAAGTGAGAAGCTTCAAGAGACAGTGCCTGAGCTGCTTAAAAACTCCTTGCTTGTAATGAAGATGAGGGGTATACTGGCACAGAGGAGTGCCTTGGGTGGTGATAGTTTGTGGGAATTAACATGGCTTCATGTGAATAACATTTCACCATCATTGCAACTTGAGGTATTCCCCGAGCAGGATTCTGAGCATTTGCAGCACAAACAGGCTGAATCCGTAGGAGATTTAGTGCCTGATGAAATGGGTTCTGCTCCTTCAAGTGAAACTGCCAGCCGTGAAGATGCTAGCATTGTTGGTTAA 4425 0.4221 MGRLKLQAGINAIEEEEPEECDASYPNKTTLACMINSEIGAVLAVMRRNVRWGGRYMSGDDQLEHTLIQSFKALKRQIFSWHHHQWQAINPALYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDQNTVNVEDAMHLVVDAVTSCRFEVTDPSSEEVVLMKILQVLLACMKSKASVMLSNQHVCTIVNTCFRIVHQSGGKGELLQQIARYTMNELVRCIFSHLQDVDNMDHALVNGSSNLKQEQTGSLNSEYAFGSRQLENGSMSSEYDNQPLPTNFAPNAANVVTATVMDENTAIAISGKDGVSYGTHLMTEPYGVPCMVEVFHFFCSLLNVIEHTEMGPRSNTIAFDEDVPLFALTLINSAVELGGPSIRRHPRLLSLIQDELFHNLMQFGLSMSPLILSMVCSIVLNLYHHLRTELKLQIEAFFSCVILRLAQSRYGASYQQQEVAMEALVDFCRQKTFMVDMYANFDCDITCSNVFEDLANLLSRSAFPVNCPLSTMHILALDGLIAVIQGMAERIANGSVSSEYSPVNLEEYTPFWMVKCENYSDPNHWVPFARRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSMIMLNTDQHNVQVKKKMTEDDFIRNNRHINGGNDLPREFLSEIYHSICKNEIRTTPEQGVGFPEMTPSRWIDLMHKSKKTAPFIVSDSKAYLDHDMFAIMSGPTIAAISVVFDHAEHEDVYQTCMDGFLAIAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVEEPVLAFGDDMKARMATVTVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESELSAETVHGKPIMNSLSSAHMQSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGRPQKGNSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICQRLLPYKENIADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANASHIRSPLGWRTITSLLSITARHIEASEAGFDALLFIMSDGAHLLPANYVLCVDTARQFAESRVGQAERSVRALDLMAGSVNCLAQWTTEAKEAMEEEQISKLSQDIGEMWLRLVQGLRKVCLDQREEVRNHALLSLQRCLTGADGIYLPYSLWLQCFDLVIFTVLDDLLEIAQGHSQKDYRNMEGTLILAMKLLSKVFLQLLPDLSQLTTFCKLWLGVLSRMEKYMKVKVRGKRSEKLQETVPELLKNSLLVMKMRGILAQRSALGGDSLWELTWLHVNNISPSLQLEVFPEQDSEHLQHKQAESVGDLVPDEMGSAPSSETASREDASIVG. 1475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02249 1474 ProSiteProfiles SEC7 domain profile. 561 750 IPR000904 GO:0005085|GO:0032012
Seca6g02249 1474 FunFam ARF guanine-nucleotide exchange factor GNOM 562 644 - -
Seca6g02249 1474 SMART sec7_5 565 752 IPR000904 GO:0005085|GO:0032012
Seca6g02249 1474 Pfam Sec7 domain 569 752 IPR000904 GO:0005085|GO:0032012
Seca6g02249 1474 Gene3D - 562 644 - -
Seca6g02249 1474 Gene3D - 645 761 IPR023394 -
Seca6g02249 1474 MobiDBLite consensus disorder prediction 1440 1474 - -
Seca6g02249 1474 SUPERFAMILY Sec7 domain 566 755 IPR035999 GO:0005085|GO:0032012
Seca6g02249 1474 CDD Sec7 569 752 IPR000904 GO:0005085|GO:0032012
Seca6g02249 1474 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 72 1437 - -
Seca6g02249 1474 SUPERFAMILY ARM repeat 156 1357 IPR016024 -
Seca6g02249 1474 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 322 483 IPR032691 -
Seca6g02249 1474 FunFam ARF guanine-nucleotide exchange factor GNOM-like 644 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02249 Seca-Chr6 83445034 83451942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02249 K18443 - gmx:100780239 2749.16