Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02242 ATGAGTTCACATAGTATGCTGGATATTGTTTTAAATGATATACTTCGGGTCCTCACACCCGTACAAGAAGATTGGGCGGTGCGGTTTGCAATTATGAATGATTTGAGAAGTGTTGTCGAATCTGTGGAAAACCTGAGAGGAGCAACTGTTGAGCCATTTGGGTCATTTGTATCTAATCTTTTCACAAGATGGGGTGACTTGGATATTTCAATTGAGTTATCAAATGGTTCACATATTTCATCTGCTGGGAAAAGACAAAAACAAACGTTATTGGGAGATCTTTTAAAAGCTTTGAAAATGAAAGGTGGATGGATCAACTTGCAGTTCATCTCCAATGCACGAGTTCCAATTTTAAAATTTAAAAGCAGACGACAGGGTGTATCTTGTGACATTTCAATCAATAACCTGCAGGGCCTGATGAAATCCAAGATTATGCTTTGGATCAGCAAGATAGATGGTCGTTTTCATGATATGGTTTTAGTGGTGAAAGAATGGGCCAAAGCACATAAAATCAATAACTCTAAAACGGGAACTTTCAACTCTTATTCCCTATGTTTACTTGTAATCTTTCACTTTCAGACATGTGCTCCTGCAATTTTGCCCCCACTTAAAGATATATACCCTGGCAATATGGTTGATGATCTTAGAGGTGTTAGAGCTGATGCAGAGAATCTTATTGCAGAAACATGTGATGCTAACATAAACCGGTTCATATCAGACAAGTCCAGGTCAACTAACAGAAAATCTTTGCCTGAACTTTTTGTTGAATTCCTTAGAAAGTTTGCTCAGATGGATTCATGGGCCTCACAGCTGGGAATTTGCCCATATACTGGACAATGGGAACAGATAGATAGCAACATGAGATGGTTGCCCAAGACTTACGCAATATTCGTAATACACTGCTCACTTGAACAAAACCTTCCTCTTTACATTTTGTGTGACATTATGGTTTTGTTTAGGGGATAA 966 0.3841 MSSHSMLDIVLNDILRVLTPVQEDWAVRFAIMNDLRSVVESVENLRGATVEPFGSFVSNLFTRWGDLDISIELSNGSHISSAGKRQKQTLLGDLLKALKMKGGWINLQFISNARVPILKFKSRRQGVSCDISINNLQGLMKSKIMLWISKIDGRFHDMVLVVKEWAKAHKINNSKTGTFNSYSLCLLVIFHFQTCAPAILPPLKDIYPGNMVDDLRGVRADAENLIAETCDANINRFISDKSRSTNRKSLPELFVEFLRKFAQMDSWASQLGICPYTGQWEQIDSNMRWLPKTYAIFVIHCSLEQNLPLYILCDIMVLFRG. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02242 321 Gene3D - 152 298 - -
Seca6g02242 321 Gene3D Beta Polymerase, domain 2 30 151 IPR043519 -
Seca6g02242 321 Pfam Nucleotidyltransferase domain 36 135 IPR002934 GO:0016779
Seca6g02242 321 PANTHER POLY A POLYMERASE CID PAP -RELATED 5 304 - -
Seca6g02242 321 CDD NT_PAP_TUTase 27 149 - -
Seca6g02242 321 SUPERFAMILY Nucleotidyltransferase 6 149 IPR043519 -
Seca6g02242 321 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02242 Seca-Chr6 83349730 83357737 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02242 - - ahf:112791586 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02242 6 83349730 83357737 Seca6g02242 6 83349730 83357737 ECH