Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02176 ATGGTTGCATTCTCCCTCTTCATCTTTTGTTCCTTAATCCTTCTCGTTCAACCTTCTTCTTCTTCTTCTTCTTCCCTTAGCGTTGTTATTCACCCCAGTTTCGACCCTGACATCAACCTCTTCGGCGATGCACAGTTTGTCGTCGTCGACCACGGCGCTGACTCTCACGTGAAACTCACGCGCCCTTCTCATTCCTCCTCCGGCCTCCTCCTCCGCCGCCACCCCATCACCTTCGCCGGCCCCACTTCCCTCTCTGTTGAATTCTCCTTCTCGATCTCCCCTTCCTCCGGCGATGGCCTTCTCTTCCTCCTTGTTCCCGGCGATTTCTCCGCTGGGTTCCCCGGGAACGGTTCCTTCGGGCTCTCTCCGGTGAAGAACAGTTACCTTGGCGTGGAGTTTGATACCTCAAAGGATGACAATGTGGGTGATGTGAATGCCAATCATGTCGGCATTGATGTGGGAAGCCTTGTTTCCGTCGCTGTTGCCAATGTTTCTGCGGTGAATTTGGTTCTCAATGGTGGGGGAAAGTTACATGCTTGGATTGATTATGAGGCTGGTTCTAAGGCATTGGAAGTTAGGTTGAGCAAATGGGGTGAACCCAGATCTTTAGATCCAATTGTTTCGCATGAGATTGATTTGTTTAAGATTTGGGGTGGAGAACCTGTGTTTGTGGGTTTGAGTTCTTCCAATGATGCTGACTCGGTGCAGGTTGTTAGTGTCTATTCATGGAAGCTTAGTTTGAGGAAGGTTTCAAAGTCTTTGCATTCTCAACCTGCAGATCCTCGAGGGTTCTCTGATAAACACGTTCAGCCCTTGACGCTTGTTGGTGGGGTGATTTTTGGGACTGTGTGTGTTGCTTTGGTCACATTTGTGGTGCTGTTTATGTGGGTTATCTTTTTCCATAGGAATGGGGAAGAGTCTCTTGTTAAGATCCCTGATCACCCTGCTGATGTCAGGTATGAAAGAATTGATGTTGCTGTTGACAAGAATACCGAAGAGGATGAAAATTAG 1011 0.4857 MVAFSLFIFCSLILLVQPSSSSSSSLSVVIHPSFDPDINLFGDAQFVVVDHGADSHVKLTRPSHSSSGLLLRRHPITFAGPTSLSVEFSFSISPSSGDGLLFLLVPGDFSAGFPGNGSFGLSPVKNSYLGVEFDTSKDDNVGDVNANHVGIDVGSLVSVAVANVSAVNLVLNGGGKLHAWIDYEAGSKALEVRLSKWGEPRSLDPIVSHEIDLFKIWGGEPVFVGLSSSNDADSVQVVSVYSWKLSLRKVSKSLHSQPADPRGFSDKHVQPLTLVGGVIFGTVCVALVTFVVLFMWVIFFHRNGEESLVKIPDHPADVRYERIDVAVDKNTEEDEN. 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02176 336 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 248 IPR013320 -
Seca6g02176 336 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 6 312 - -
Seca6g02176 336 Gene3D - 29 257 - -
Seca6g02176 336 CDD lectin_legume_LecRK_Arcelin_ConA 32 246 IPR001220 GO:0030246
Seca6g02176 336 Pfam Legume lectin domain 33 257 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02176 Seca-Chr6 82197540 82198550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02176 53 256 Receptor kinase-like Gene Family AT5G55830 32.773 3.54e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02176 - - tpra:123898370 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02176 6 82197540 82198550 Seca6g02176 6 82197540 82198550 ECH