Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02147 ATGGCGCCATCGCGTCCCCCTCCGTCGAAGTCGGTGGATCTGGACCTAACCATCGTCTCCGCCAAGCACCTCAAAAACGTCAACTGGAAAAACGGCGACCTCAAGCCCTACGTCGTCTTCTGGGTCGATCCCGATCGCCGTCTCGCCACCAAATCCGACGACTCCGGCAACACCTCCCCCGTCTGGAACGAACGTTTCGCCCTCCCTCTCTCTCTTCCCCTCCACGACTCCTTCCTCACCCTCGAGATCTTCCATTCCAAACCCTCCGACACTCCCAAACCCCTCGTCGCCACCCTCCGTCTCCCCCTCGCAGACCTCCACGACCTCCACGATTCTACGCGCCTCCGCAAATTCACCCTCACTCGCCCCTCCGGTCGCCCTCAGGGTAAGATCCACCTCAAGCTCGGCCTCCTTGGCCGCCCCGATTACCCTCCCCCAAACCCTAACCCTAATCCCAATCCTACTCCTACCCCTAATCCTAATCCTAATCCCAGTCCTTCCTTTCTCTACTACAGGGGATACGCTCCTTCACCTTCTCCACCACCGTCTCCCTACCCTTCCTACACCTCCTACGCTGATTCCTACTCTGGTGGTTACTATCCTGGCTACTATTCCGGTGCTCCTCCCCCTCCTCCGCCGCCGAGGCCTTTCTTTGACCGTCCAACCGGTTACGCTGGGCCTAGTGGGCCTTCCGCTCCGCTCGATTATTCCTCCTCCTCGTATGACACGAGGCCCAGGGGGAGCGGGAAGATGGGCCTGGGCGCTGGGCTAGCTGTCGGCGCTGTTGCTGGGGCTCTGGGTGGGCTTGCTCTGGAAGAGGGGCTGAAATATGAAGAGGACAAAATCGCTGAGAGGGTTGAAAACGACGTCGCTGCGCGGGATGATTATGGCGATTACCGAGATTACTAA 909 0.5952 MAPSRPPPSKSVDLDLTIVSAKHLKNVNWKNGDLKPYVVFWVDPDRRLATKSDDSGNTSPVWNERFALPLSLPLHDSFLTLEIFHSKPSDTPKPLVATLRLPLADLHDLHDSTRLRKFTLTRPSGRPQGKIHLKLGLLGRPDYPPPNPNPNPNPTPTPNPNPNPSPSFLYYRGYAPSPSPPPSPYPSYTSYADSYSGGYYPGYYSGAPPPPPPPRPFFDRPTGYAGPSGPSAPLDYSSSSYDTRPRGSGKMGLGAGLAVGAVAGALGGLALEEGLKYEEDKIAERVENDVAARDDYGDYRDY. 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02147 302 Gene3D C2 domain 5 138 IPR035892 -
Seca6g02147 302 MobiDBLite consensus disorder prediction 206 248 - -
Seca6g02147 302 Pfam C2 domain 13 108 IPR000008 -
Seca6g02147 302 SMART C2_3c 13 115 IPR000008 -
Seca6g02147 302 MobiDBLite consensus disorder prediction 206 220 - -
Seca6g02147 302 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Seca6g02147 302 MobiDBLite consensus disorder prediction 141 165 - -
Seca6g02147 302 MobiDBLite consensus disorder prediction 136 184 - -
Seca6g02147 302 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 142 IPR035892 -
Seca6g02147 302 PANTHER INGRESSION PROTEIN FIC1 14 261 - -
Seca6g02147 302 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02147 Seca-Chr6 81657455 81658363 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02147 - - gmx:102666594 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02147 6 81657455 81658363 Seca6g02147 6 81657455 81658363 ECH