Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02065 ATGATTCACTCCACTTCTCTCCTTCCCCATAACAACCGTTTCTTCCTCTTCTCCTTTCGCTCCAAAGCTTCCTATTCGCATTCCGATTCACACTCACACTCACACTCACACCCTCTTTCATTCGCAAAATCCCTATCTCTTCCACCATCTTCTCCGCAATCATCGTCATGTTGCCGCGTCGCGCGCGTTTCCACGGAGGCCTTGGAGTTGTCGCCACCGCCGCCGGGCTTCAACTTCCGCCGCGAAATTGCCAGGCTCACCGCTCTCCGTGACGAGCTCGCGGGCTGCTCCACTCTCGAGGAGAAGCTCCGAGTGGTCGATGCTGATTCCAGAGTGAGGCGATTGTTCGGTTCCTCTCACCGCCGGAATGCCGGAACGCTTGCTAGGGTTTTGGCCGCGCTCCGATTGGACTCCTACGAGTTGTTCATGCTCAAGTGCTTGGTTGCCGCCGGGCAAGAGCACGTGCTGTGTTTGGGCGAGGCTGGACCACCGTTGGAGTCGCCTGAGACTGCCGGCGGCTCCTTGAAGAGCGCGTTTTATGCTCTGGCGGAGATGATCGAGAATTTGGATTTCCATGACGGCAATGCCAGTGCGGGTTTTGGCAAGATGGGAATGGCGTTGGAGGATCATGAAATTCGGGATTTGAACAAGTTGTTAGAGACTTTGGCGCAGATTGAGAGCTTCTATGATTGCATTGGAGGAATTATTGGATATCAGATAACAGTAATGGAACTTCTTGTCCAAAACTTGTTTGAGGGGCAGAATATAAACTGGTCTGAGCACATGCACAAAGTGAAGGAATGCCAAATTTTTGGAATTGATGCACCTACTGGGCTTGACCTTTCTGAAAATACAGAGTATGCGTCTCAAGCAGCTCTATGGGGTATAGAGGGTTTGCCAGACCTAGGTGAAATTTATCCTTTGGGAGGCTCTGCAGATAGGCTTGGTTTGGTTGATCCTAAAACTGGTGAATGCCTGCCTGCTGCAATGCTGCCTTATTGTGGAAAGACTTTGTTGGAAGGTCTTATAAGAGATCTTCAGGCTAGAGAATTCTTGTACTTCAAGTTATATGGGAAACAATGTATCACTCCTGTTGCAATAATGACAAGTTCTGCAAAGAACAACCATGAACACATCACTTCTCTATGTGAAAGACTTTCATGGTTTGGAAGAGGCCGATCAACTTTCCAACTTTTTGAGCAGCCTCTTGTTCCAGTTGTTGGTGCAGAAGATGGGCAGTGGTTGGTCACCAAACCATTCAGTCCCTTGAGCAAGCCTGGCGGTCATGGTGTCATATGGAAACTTGCTCATGACAAAGGCATCTTCAAATGGTTTTATTGTCATGGAAGAAAAGGTGCAACCGTGCGCCAAGTCAGTAATGTTGTGGCAGCTACAGATTTAACCCTCCTGGCCTTAGCAGGGATCGGTTTGCGTCAAGAAAAGAAACTGGGGTTTGCATCCTGCAAGCGTATCTCAGGTGCAACAGAAGGAATTAATGTGCTGATGGAGAAGAGAAGCTTTGATGGGAACTGGGAATATGGTGTGTCTTGCGTTGAATACACTGAGTTTGACAAGTTTGGGATTACTGAGGGACCTCTTGCTCCAAAAAGTTTGCAGGCAGATTTTCCAGCCAATACAAACATCTTATATGTTGATTTACCTTCTGCGGAGCTAGTTGGATCCAGTAAGAATGAAAATTGTTTACCAGGAATGGTGCTAAATACAAGAAAGCCAATAGTTTATGTAGATCAGTTTGGAAGACATTGTAGCGTCTCTGGTGGCAGACTAGAGTGCACAATGCAAAATATAGCAGACAATTATTTCAATTCATATTCATCTAGGTGTTATAATGGTGTGGAAGATAAGCTAGATACATTTATTGTATATAACGAACGGAGAAGGGTTACCTCATCTGCTAAGAAAAAGAGAAAACATGGAGACAAGTCTCTACACCAGACACCTGATGGATCTCTATTGGATATCTTACGAAATGCTCATGATCTTCTTTCACAATGTGAGATAAGACTTCCTGAGATTGAAGCTAATGAGAACTATGTTGATTCAGGACCACCATTTCTCATCTTTCTTCATCCTGCTCTCGGTCCTCTTTGGGAAGTTACCAGACAAAAATTTTATGGTGGTTCCATATCAGAGGGCTCTGAGTTACAAATAGAGGTTGCGGAGTTCTTTTGGAGGAATGTTGAGCTCAATGGAAGCCTGATAGTAATAGCTGATAATATTATGGGCTCAATGAAGATTAATGAGAGTGGTGAATCCATACTACAATATGGGCAAAGGTGTGGAAGATGTAAATTGCAGAATGTCAAGGTGCTGAACAAGGGAATTGATTGGAGTTATGGTGGAAATGTATACTGGAAACATGATGTGCAGCGGTCTGAGATGTTGCAGATCATACTGCATGGAAATGCCGAATTTGAGGCTACTGATGTTGTCTTACAGGGAAATCATGTATTTGAAGTCCCAGATGGCTACAAACTGAAGATCTTGCCAGGAAGCAAAGGTTTAGCAATCCAGTTGGATCCGATTGAACAGTGTATGATGGATAATGGAAGCTGGCACTGGAATTACAAGATAGAAGGTTCTCACATTCAGCTAGAATTAGTAGAATCGTAG 2634 0.451 MIHSTSLLPHNNRFFLFSFRSKASYSHSDSHSHSHSHPLSFAKSLSLPPSSPQSSSCCRVARVSTEALELSPPPPGFNFRREIARLTALRDELAGCSTLEEKLRVVDADSRVRRLFGSSHRRNAGTLARVLAALRLDSYELFMLKCLVAAGQEHVLCLGEAGPPLESPETAGGSLKSAFYALAEMIENLDFHDGNASAGFGKMGMALEDHEIRDLNKLLETLAQIESFYDCIGGIIGYQITVMELLVQNLFEGQNINWSEHMHKVKECQIFGIDAPTGLDLSENTEYASQAALWGIEGLPDLGEIYPLGGSADRLGLVDPKTGECLPAAMLPYCGKTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHEHITSLCERLSWFGRGRSTFQLFEQPLVPVVGAEDGQWLVTKPFSPLSKPGGHGVIWKLAHDKGIFKWFYCHGRKGATVRQVSNVVAATDLTLLALAGIGLRQEKKLGFASCKRISGATEGINVLMEKRSFDGNWEYGVSCVEYTEFDKFGITEGPLAPKSLQADFPANTNILYVDLPSAELVGSSKNENCLPGMVLNTRKPIVYVDQFGRHCSVSGGRLECTMQNIADNYFNSYSSRCYNGVEDKLDTFIVYNERRRVTSSAKKKRKHGDKSLHQTPDGSLLDILRNAHDLLSQCEIRLPEIEANENYVDSGPPFLIFLHPALGPLWEVTRQKFYGGSISEGSELQIEVAEFFWRNVELNGSLIVIADNIMGSMKINESGESILQYGQRCGRCKLQNVKVLNKGIDWSYGGNVYWKHDVQRSEMLQIILHGNAEFEATDVVLQGNHVFEVPDGYKLKILPGSKGLAIQLDPIEQCMMDNGSWHWNYKIEGSHIQLELVES. 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02065 877 FunFam UTP--glucose-1-phosphate uridylyltransferase 3 chloroplastic 202 664 - -
Seca6g02065 877 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 204 660 IPR029044 -
Seca6g02065 877 SUPERFAMILY Nucleotide-diphospho-sugar transferases 142 747 IPR029044 -
Seca6g02065 877 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 61 804 IPR039741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02065 Seca-Chr6 80107226 80118578 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02065 K22920 - gmx:100804343 1430.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02065 6 80107226 80118578 Seca6g02065 6 80107226 80118578 ECH