Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02054 ATGTCCACGCCCAAACCCACATCCGAGCCAGAGCCTCAACCCTCTGCTTCTTCCGAAGCTCCACCTCCCTTTGATCCCACGCAACCCTCCGTTCCCATTTCTTATCCAATCAAGACCCTTCAGGAACTCGAGTCTCGCTCCTATTTCGAGTCCTTTCACTACCCTTTCAACAAAGCTTCGGTTCCCATCCTCGATTCTTCATCACCCAATAGGCGCAGATTGCTGGTGTGCCATGATATGGCTGGGGGTTACTTGGATGATAAGTGGATTCAAGGTGGCACGAATCCTAATGCTTATGCTATTTGGCATTGGCATTTGATCGATGTGTTTGTTTACTTTTCACACAATCTGGTGTTGGGGACTTTCATCACCGAATGGGATGAGGGAAGGGCTGTCTGTGACGTGCTGCTTTCAACAAAGGAGTCTGCACAAATGTATGCAGAACGTCTGGCAGAGCTTGCTGTTGATTTAGGCTTTGATGGGTGGCTAATAAATATGGAAGTAAATTTGGATCCAGGGCAAATTTCTAATTTGAAAGAGTTTGTAGATCATTTGTCATTAAGGATGCATTCTTCTGTGCCTGGATCATTAGTGATATGGTATGACAGTGTTACAATTGATGGTAATCTGAGTTGGCAAGATCAACTAAACAAATATAATAAGCCGTTCTTTGATATATGTGATGGAATATTTGTAAACTATACATGGAAGGAAGACTATCCAAGGCTCTCTGCTGCTGTTGCCGGTGATCGGAAGCATGATGTGTACATGGGAATTGATGTATTTGGAAGGAACACATATGGTGGTGGACAGTGGAATGTATGTGGTCTGTGA 834 0.4424 MSTPKPTSEPEPQPSASSEAPPPFDPTQPSVPISYPIKTLQELESRSYFESFHYPFNKASVPILDSSSPNRRRLLVCHDMAGGYLDDKWIQGGTNPNAYAIWHWHLIDVFVYFSHNLVLGTFITEWDEGRAVCDVLLSTKESAQMYAERLAELAVDLGFDGWLINMEVNLDPGQISNLKEFVDHLSLRMHSSVPGSLVIWYDSVTIDGNLSWQDQLNKYNKPFFDICDGIFVNYTWKEDYPRLSAAVAGDRKHDVYMGIDVFGRNTYGGGQWNVCGL. 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02054 277 Gene3D Glycosidases 27 277 - -
Seca6g02054 277 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 15 274 IPR032979 GO:0033925
Seca6g02054 277 MobiDBLite consensus disorder prediction 1 31 - -
Seca6g02054 277 MobiDBLite consensus disorder prediction 1 30 - -
Seca6g02054 277 Pfam Glycosyl hydrolase family 85 118 273 IPR005201 GO:0005737|GO:0033925
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02054 Seca-Chr6 79942077 79944714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02054 16 274 Glycoside Hydrolase AT3G11040 64.875 9.17e-131 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02054 K01227 - gmx:100804658 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02054 6 79942077 79944714 Seca6g02054 6 79942077 79944714 ECH