Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02019 ATGAAGCCCCACACTCAGGCTTCCTTCGCCACTGGACCGCCGCACGTGACCTACTTTCGCCGCACCACTCCTTCACGTGCCGCGCCATCGGAGACTCATCTTCCGCCGCCGCCCTACGCCGGCGACCACGAATTCCGGCGCATATTGACCGCCAAACACCGCCGCGTCAAATTATCCATTAACTGCTCGAATCGCGCCGTTGCGGCTTGGAAACCCGAACATTCCGACCGGAATGATGGCGTAAGGGAAAACTCGGTTGAACCTGTCGAGCCAACGGATAAGGCTCAATTCAACCGGCGAGGAGTGCTGGTCGCGCCGTTCCTGGCTGTTGGCGCGTCGTTTCTGCTCTCTGCAGCGGCGACTAGGGCGGAAGAGAAGCCGCCATCACCGTCACCGGCGGATTTGACGGCTTTGAAAGCGGAGGAGCAGACGAAGAAGGAGGAGGAAGTGATAACATCGAGGATTTATGACGCGACAGCGATAGGGGAACCGTTAGCGATAGGGAAAGAGAAAGGGAAAGTGTGGGAGAAATTGATGAATGGTCGAGTGGTTTATTTGGGGGAAGCGGAGCAGGTTCCGGTTCGAGACGACAAGGATTTGGAGCTTGAGATTGTGAGGAATTTGCATAGGCGGTGTGTTGAGCAAGATAAGAAATTGTCTTTGGCTCTTGAAGCGTTTCCCTCTAATCTCCAGGAACAGCTCAATCAGTATATGGATAAAAAGTTCATACTGAAATTTGACTTTCATGGCAGGATAGATGGAGAAACCTTGAAATCTTATACAGTGCATTGGCCTCCTCAACGATGGCAGGAGTATGAACCTATTCTTAGTTACTGTCGTGAAAATGGAATTCATCTTGTTGCTTGTGGTACTCCACTGGCGATCTTAAGGACTGTCCAAGCAGAAGGAATTCGTGGGCTTACAAAGGCTGAACGTAAATTATATACACCTCCAGCTGGTTCAGGCTTCATATCAGGATTTACTTCTATCTCACGTAGATCTGCAGTTGATAGTACTCCAAATCTGTCTTTTCCTTTTGGTCCAAGCTCATATCTATCTGTACAGGCTAGAGTAGTTGAGGAGTATACCATGTCCCAGATAATCTTACAAAATGTGCTTGATGGAGGTCCCAATGGTATGTTAATAGTTGTCACTGGTGCCAGCCATGTTACATATGGATCTAGAGGGACAGGAGTGCCGGCAAGAATTTCAGGAAAAATACAAAAGAAAAACCAAGTAGTTGTATTACTTGACCCTGAAAGACAATTCATCCGGAGAGAGGGAGAAGTTCCTGTTGCGGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAATAGAAATTGCTTTGACCGTGCTGAGATTGCTCGGGTTATGAATGCTGCTGGGCGGAGGAGAGATGCCCTCCCACAGGATCTTCAAAAGGGGATTGATCTTGGTTTAGTATCACCAGAGGTATTGCAGAACTTCTTTGATCTAGAGCAGTATCCTCTGATTTCAGAACTCACTCACCGTTTCCAGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGCATAGATTAGCCATAGAAGAAGCTATATCAATAACAACTACATTATTAGCACAATATGAAAAGCGGAAGGAAAACTTTTTTCAAGAGCTTGACTATGTTATTACGGACACCGTCAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCAACTTTGTCATTCCTTTCATATGCTGATGAGACAAATGCGCCTGAGAACATTAATTCTTTAATGGGTCTTCTTGGCTCCATACCAGACAATGCATTTCAAAAGAATCCAGCAGGGACAAACTGGGATCTCAATCACCGAGTTGCATCAGTTGTATTTGGTGGTTTAAAACTAGCTAGTGTTGGATTTATTTCAAGTATAGGAGCTGTGGCTTCGTCAAATTCACTGTATGCACTTCGTAAATTCCTTAATCCAGCAGTTGTCACTAATCAACGAATTTTAAGGTCACCGATACTCAAAACAGCAGTTGTTTATGCATGTTTTCTTGGACTATCTGCAAATCTCCGTTATCAGATAATTGCTGGGGTAGTGGAGCATCGGGTTTCTGAACAGTTTTCTTCCCAAACATTTCTTGTAAATATGCTATCTTTTGTAGCACGGACAATCAATTCCTATTGGGGAACCCAGCAATGGATTGACCTTGCACGCTTCACCGGACTTCAAGTTAGAAAGACAGAGTCACCTACATCAGATTCTCCGAATCATGCTGCAGTTTTATGCAACGAAACAGAAGAAGCCAGCATCGATGAGATTAAAAAGTAA 2316 0.4555 MKPHTQASFATGPPHVTYFRRTTPSRAAPSETHLPPPPYAGDHEFRRILTAKHRRVKLSINCSNRAVAAWKPEHSDRNDGVRENSVEPVEPTDKAQFNRRGVLVAPFLAVGASFLLSAAATRAEEKPPSPSPADLTALKAEEQTKKEEEVITSRIYDATAIGEPLAIGKEKGKVWEKLMNGRVVYLGEAEQVPVRDDKDLELEIVRNLHRRCVEQDKKLSLALEAFPSNLQEQLNQYMDKKFILKFDFHGRIDGETLKSYTVHWPPQRWQEYEPILSYCRENGIHLVACGTPLAILRTVQAEGIRGLTKAERKLYTPPAGSGFISGFTSISRRSAVDSTPNLSFPFGPSSYLSVQARVVEEYTMSQIILQNVLDGGPNGMLIVVTGASHVTYGSRGTGVPARISGKIQKKNQVVVLLDPERQFIRREGEVPVADFLWYSAARPCNRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADETNAPENINSLMGLLGSIPDNAFQKNPAGTNWDLNHRVASVVFGGLKLASVGFISSIGAVASSNSLYALRKFLNPAVVTNQRILRSPILKTAVVYACFLGLSANLRYQIIAGVVEHRVSEQFSSQTFLVNMLSFVARTINSYWGTQQWIDLARFTGLQVRKTESPTSDSPNHAAVLCNETEEASIDEIKK. 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02019 771 Gene3D - 139 442 - -
Seca6g02019 771 MobiDBLite consensus disorder prediction 1 42 - -
Seca6g02019 771 Pfam Haem-binding uptake, Tiki superfamily, ChaN 174 403 IPR007314 -
Seca6g02019 771 Pfam Protein RETICULATA-related 510 694 IPR021825 -
Seca6g02019 771 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 53 770 - -
Seca6g02019 771 MobiDBLite consensus disorder prediction 71 89 - -
Seca6g02019 771 SUPERFAMILY EreA/ChaN-like 173 439 - -
Seca6g02019 771 MobiDBLite consensus disorder prediction 71 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02019 Seca-Chr6 79409771 79415214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02019 - - mtr:11418002 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02019 6 79409771 79415214 Seca6g02019 6 79409771 79415214 ECH