Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01986 ATGGACTTCACCACTTTCGCTAATTCCAGAGCCTCTTCTCATGCAATCCCTCCCACACACCCCTATCGCCTTCAACCCTCTCCTTTTCCTCTCCAGTTACCGTATTTGAAATTAAAGCGTTTGAGTTTGGATAAGAATCGCTTAATTGCCCGTTGCACTGCTGGGTCCGATGAATTTGGCTCTGTTAATGGGTTGCAATTCACACCCAATAAGCTCTTCGTGCAGGAGGCTATTGGAGCTGAGTATGGGGAAGGTTTTGAGACCTTTAGGGCTGATGGACCATTAAAAGTTGATGTTGACTATTTGAATGATAAATTGCAAGATGGTTTTCTCCAGCGCATACGCTATGCTATGAAACCAGATGAGGCTTACGGTCTTATCTTCTCTTGGGATAATGTGGTGGCTGATACTCTAGCTCTGAAGAGGAAGGCATGGAAGCAGCTGGCCTCTGAAGAGGGAAAGGATATTCCTGAAGATGGTGATAGTGAAAGATTAATGCTTTATGCTGCTGCTGATCATGTGTTGCATAAGCATTTTCTCTCAGATAAGGCAGAAAATGAGCTGGATAGACTGAAGTTGAGGTTTTCTCAGTTATATTATGATAATCTTCTAAGACTTGAAAGACCAATGGAGGGCCTCAAAGATTGGTTGGAAGCGGTTTATACAGCTCGGATCCCCTGTGCTGTTGTTTCAAGTCTTGATAGAAGAAATATGGTAGAATCGTTGGATCGAATGGGGCTCAATAAGTATTTCCAGGCCATTGTGACGGAAGAGGATGGAATGGAGTCAATAGCTCATAGATTTCTTTCTGCTGCTGTCAAGGTACAATTCCACCCATATATTTTATTTTGA 852 0.4296 MDFTTFANSRASSHAIPPTHPYRLQPSPFPLQLPYLKLKRLSLDKNRLIARCTAGSDEFGSVNGLQFTPNKLFVQEAIGAEYGEGFETFRADGPLKVDVDYLNDKLQDGFLQRIRYAMKPDEAYGLIFSWDNVVADTLALKRKAWKQLASEEGKDIPEDGDSERLMLYAAADHVLHKHFLSDKAENELDRLKLRFSQLYYDNLLRLERPMEGLKDWLEAVYTARIPCAVVSSLDRRNMVESLDRMGLNKYFQAIVTEEDGMESIAHRFLSAAVKVQFHPYILF. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01986 283 MobiDBLite consensus disorder prediction 1 15 - -
Seca6g01986 283 MobiDBLite consensus disorder prediction 1 23 - -
Seca6g01986 283 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 7 277 - -
Seca6g01986 283 Gene3D Putative phosphatase; domain 2 136 209 IPR023198 -
Seca6g01986 283 SUPERFAMILY HAD-like 99 260 IPR036412 -
Seca6g01986 283 Gene3D - 126 259 IPR023214 -
Seca6g01986 283 CDD HAD_BPGM-like 125 279 - -
Seca6g01986 283 Pfam Haloacid dehalogenase-like hydrolase 126 259 IPR041492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01986 Seca-Chr6 78848217 78852920 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01986 - - gmx:100817685 481.485