Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01985 ATGGCTGAAACTTGCGAAGCTGTCGCCGATGGGGTGCCCGGAACGCCTGCTATAAGGGAGGTGAGACCCGAGACAGGGACTCAGAGGCTCGATGCTGGAGTCGGGTCGGGTGGGAACCCGATTCGAGGGATCAGGAGGGTGAATTTGCGAGCTGAGATTGATACGTCGCCGCCATTCGGGTCAGTGAAGGAGGCCGTGACCCGTTTCGGAGGTAGCGGGCCTTGGATACCACTTTACAAGCTTGGAGAGGCTTATAACAACTTTGAAGATTTTGACATAAAGAAAGTGGAGGAACAAGCAGCAGAGCTGGAGAAGGATTTGATAGTCAAAGAACTTGAAACACTTGATGTGCTTGAAGAATTGGGAGCTACCAAAAGGATTGTGGAGGACTTAAAGCAGCAGCTACAAAAAGAAGCATTGAAATGTTTTGCACCTCCAGATGTAAATCCTTGTGAGCAGATTGGAACTCCTGTTATTAAGGAGATGAATAAGGAAAATTATGAAAATATTGTCAACAATCAAGAACAGATCTTGCAAATTCCAAATGCATGCTCCATGTCACCACCTGATCTGATCTTAATGGAATTGAAACAAGCCAAAGTGAATCTTGGAAAAACTATAAATGAACTCGGGGTGATTCAATCCTCTGTTGAATCTTTAAATAAGAAGATGAAGAAAGAGAAGCTTTTTCTGGAGAAGACACGTGAAAAGTTGGCATCAAAGTTTGCAGCTGTCTCTGCACAAGAGAAGGACCAAGAGCAAACAAGATTAAATCCACCGCCAGCATCTCATGTAGAATGCACTTTTAATAATCCTGCAAATATTATGAGGAATTTCAATTCTGATTCTCAGCAGTGCAATAGAATGATTGAAACAAGAAGATCTGAAGTTTCAAGGCCCTTACCTGTGTATGAAGAACATGAGTTTAGTGTTAAGACTGCTGAGATGAGGTGGCTTGCAGCTAAAAAGATGGAAGAAGCTGCAAGGGCAGCAGAAGCTATTGCTCTTGCTGAAATCAAGGCTCTATCTATTGCTGATAGACCATCAGAATTTGCTCTGCCAGAACCTGAGAAAGTAACTTTTGCTTTAGCAGAGCGCTCTCCTCTAAACCCCATGGCTCAGCAGATACCTGAGGAGTCAACCTTGAAAAAGGTAATAGATTCCAAGTTTCAAATTAATGAAACAAATATTTCTAGATTGACTATTTTGAAGAAGTTGGAGGAGGCAACAAAGGAAGTTCTGTACAGCAAACATGTCTTGACAGATGCTTTAAACAGAGTTGAAAATGCAAACAGAAAGCAACATGCAGCTGAGGAGGCTCTTCGGAGATGGATTCCGGAGGATGATCTGAAGGAGCAAGCCATGTATAACTCTATTAATTGCAACAAGTTTAATCAAGCTGGAATTTGTCAAGATATTCCTCTACCAGATGTAACCAGGTCAACAACAGCAAACAATGATAGGAAGCCTGTTTTAAGGTCCACAATTTCAATGAGAGATGTACTTAGCAGAAAGCAAGTTCCTGAAGGATATGCTACAAGAAAAGAGATGGAAGAGCACACTGAAAGACAAAAGGTAGCATTGAGTCAAATGCTTCGAGCATTGAGGGAAGATCTAACTCTTCCACGGAAAGCTGAGAAAGATGGGAGCGATCAAAAGCAGTTTATATCACAGAGGAAGAAGTTTGGATTCATCCAAATATCCCTCCCTCTGACAAGGCCAAGTAAGAAAAGGGCATGA 1740 0.4236 MAETCEAVADGVPGTPAIREVRPETGTQRLDAGVGSGGNPIRGIRRVNLRAEIDTSPPFGSVKEAVTRFGGSGPWIPLYKLGEAYNNFEDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEALKCFAPPDVNPCEQIGTPVIKEMNKENYENIVNNQEQILQIPNACSMSPPDLILMELKQAKVNLGKTINELGVIQSSVESLNKKMKKEKLFLEKTREKLASKFAAVSAQEKDQEQTRLNPPPASHVECTFNNPANIMRNFNSDSQQCNRMIETRRSEVSRPLPVYEEHEFSVKTAEMRWLAAKKMEEAARAAEAIALAEIKALSIADRPSEFALPEPEKVTFALAERSPLNPMAQQIPEESTLKKVIDSKFQINETNISRLTILKKLEEATKEVLYSKHVLTDALNRVENANRKQHAAEEALRRWIPEDDLKEQAMYNSINCNKFNQAGICQDIPLPDVTRSTTANNDRKPVLRSTISMRDVLSRKQVPEGYATRKEMEEHTERQKVALSQMLRALREDLTLPRKAEKDGSDQKQFISQRKKFGFIQISLPLTRPSKKRA. 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01985 579 Pfam Weak chloroplast movement under blue light 51 137 IPR008545 -
Seca6g01985 579 Pfam Weak chloroplast movement under blue light 194 447 IPR008545 -
Seca6g01985 579 Coils Coil 86 113 - -
Seca6g01985 579 MobiDBLite consensus disorder prediction 247 264 - -
Seca6g01985 579 Coils Coil 118 138 - -
Seca6g01985 579 Coils Coil 217 241 - -
Seca6g01985 579 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 51 138 - -
Seca6g01985 579 MobiDBLite consensus disorder prediction 245 264 - -
Seca6g01985 579 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01985 Seca-Chr6 78826542 78830358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01985 - - gmx:100818214 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01985 6 78826542 78830358 Seca6g01985 6 78826542 78830358 ECH
Seca6g01985 6 78826542 78830358 Seca6g01985 6 78826542 78830358 PCT