Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01938 ATGACACAGCAGAATGTGGTAGTGTCTGATACCAAATCTGGAGTGGCTGTAACAGTTTTCCCAACAATATCACAAAAACCACCAGCCTCACCAGGAGGAGCCTACATTTCCATTCCAAGAAGGAGGGTCTTGAAGAACCTTGAAATCAATGGTGGACAAAGAATCAATGCATGGCTTGACTCCATGAGAGCTTCTTCTCCAACTCATCTCAAATCCACACCTTCTTTGGCTGAAGAACAAAACTCTTGGATTCTTCACCACCCGTCAGCATTAGACATGTTTGACCAAATCATGGATGCGTCAAAGGGAAAACAAATTGTCATGTTTCTGGACTATGATGGTACACTGTCCCCTATAGTTGATGATCCTGACCGTGCTTTCATGTCTGATTCGATGAGGAAAACGGTTAGGAAACTTGCAAGGTGTTTTCCTACTGCTATAGTGACTGGTAGATGCAAAGACAAGGTATACAATTTTGTTCGTCTGGCAGAGCTATATTATGCTGGAAGCCATGGAATGGATATTAAAGGCCCAACAAGAACCTCCAAATACAACAAAGATAGCAAAGCTGAAGCAGTTCTTTTTCAACCTGCCAGTGAATTTCTCCCCATGATAGATGAGGTGTTCCAACAATTGGTTGATAAGACAAAATCAACTCCTGGAGCTAAGGTTGAGAACAACAAGTTCTGTGTCTCTGTTCATTTTCGTTGTGTTGAGGAAAAGGTACAACTACAAACTATAAAACCCATCAGTGTTTTCATTGAAGCTTGA 771 0.4163 MTQQNVVVSDTKSGVAVTVFPTISQKPPASPGGAYISIPRRRVLKNLEINGGQRINAWLDSMRASSPTHLKSTPSLAEEQNSWILHHPSALDMFDQIMDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKLARCFPTAIVTGRCKDKVYNFVRLAELYYAGSHGMDIKGPTRTSKYNKDSKAEAVLFQPASEFLPMIDEVFQQLVDKTKSTPGAKVENNKFCVSVHFRCVEEKVQLQTIKPISVFIEA. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01938 256 Gene3D - 188 245 - -
Seca6g01938 256 Pfam Trehalose-phosphatase 109 241 IPR003337 GO:0003824|GO:0005992
Seca6g01938 256 FunFam Trehalose 6-phosphate phosphatase 198 252 - -
Seca6g01938 256 Gene3D - 108 187 IPR023214 -
Seca6g01938 256 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 20 242 IPR044651 GO:0004805|GO:0005992
Seca6g01938 256 FunFam Trehalose 6-phosphate phosphatase 106 193 - -
Seca6g01938 256 SUPERFAMILY HAD-like 107 246 IPR036412 -
Seca6g01938 256 NCBIfam trehalose-phosphatase 104 246 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01938 Seca-Chr6 77500292 77503602 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01938 K01087 - gmx:100815357 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01938 6 77500292 77503602 Seca6g01938 6 77500292 77503602 ECH