Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01934 ATGGCAATCCCAAGCAGGTTCTTCCCTCTCCTCTTTCTGCTCTCCCTATCTCTATGCTTCACCGGAACCGTTAGATCTCAGGAGGAAGCTTGTGTGTACACGGTGTACATTAGAACCGGGTCGATCATCAAGGGAGGAACGGACTCTATAATCGGGCTCAAGTTATACGATGCCTACGGTTACGGCATATACATCACAAACCTGGAGGCATGGGGCGGGTTGATGGATCCGGGTTATAACTACTTTGAACGGGGCAACCTTGACATATTCAGTGGGAGGGGTCCTTGTTTAGACGGACCCGTTTGTGCTGTGAACTTGACTTCAGACGGGTCGGGTCCTCATCATGGATGGTACTGTAATTATGTGGAGGTGACCTCCACTGGGGTGCATACACCCTGCGCTCAGCAGCAGTTCACGGTGGAGCAGTGGCTTGCTACGGACACATCGCCCTATCAGCTATGGACTGTGAGGAACTACTGCAACTACGATTTGGGCCAGGCCCGTTTTAGAACTAAGGCTGCCACCGGTGATGGTATCAGATCTGGGTCTGATTTCTCTATTTTGGGCTCTACTGTCCGTGTGTAG 585 0.5162 MAIPSRFFPLLFLLSLSLCFTGTVRSQEEACVYTVYIRTGSIIKGGTDSIIGLKLYDAYGYGIYITNLEAWGGLMDPGYNYFERGNLDIFSGRGPCLDGPVCAVNLTSDGSGPHHGWYCNYVEVTSTGVHTPCAQQQFTVEQWLATDTSPYQLWTVRNYCNYDLGQARFRTKAATGDGIRSGSDFSILGSTVRV. 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01934 194 CDD PLAT_plant_stress 31 158 - -
Seca6g01934 194 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 32 149 IPR036392 GO:0005515
Seca6g01934 194 Gene3D PLAT/LH2 domain 19 150 - -
Seca6g01934 194 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 27 165 - -
Seca6g01934 194 Pfam PLAT/LH2 domain 33 152 IPR001024 GO:0005515
Seca6g01934 194 ProSiteProfiles PLAT domain profile. 31 158 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01934 Seca-Chr6 77397793 77399100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01934 - - adu:107469134 301.212