Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca6g01923 | ATGGCTTCATCCCAAAAACTTCCTTCCTTCAGCTGTGAACTGAGAATTATACAAGCCCAAAACATTGAATTCATCAAGCCCATGAAAAATTTGTTTGCCAGATTCTATCTTCCTGCTGGAAACAACAAAAGAATTCAACTCAACACCAAAAAGGTTCCCTCCAACTCTGTTCCCTTTTGGAATGAGTCCTTCAATCTAGAATGTTCATGTCCCCAAGAATTCTTGCAAACCCTTAAGCAGGAAAGCCTGGTGTTGGAGCTTAGGCAAAGCAACACAGGCCCAGCAGTGCTAAAGAGGATTTTAGGGTCACACCTAGTGGGAAGGGGTGAGATTCCATGGAAGACAATTCTTGAAGCACCAAATATGGAGTTCAAAGAGTGGGTGAAGGTAAGTGGAAGTGATGATTGTGATGATGATGCTACTTTAAGGGTGCCAGAAGTGCAAGTGGAGATAAAAATACAAGTGGCTTTAGATGCTGAGATAAAGAAGGAGAATAGGAGAAGGAGGTTGAACAACTGGGATGAGTGTGGGTGCAAACATGGCCATGATCAGCATGCATGGTGCAGCACTGAAGATTATGATATATTTGCTCTAGGTGCAATTTTGGAGGCTTTTTGA | 618 | 0.4256 | MASSQKLPSFSCELRIIQAQNIEFIKPMKNLFARFYLPAGNNKRIQLNTKKVPSNSVPFWNESFNLECSCPQEFLQTLKQESLVLELRQSNTGPAVLKRILGSHLVGRGEIPWKTILEAPNMEFKEWVKVSGSDDCDDDATLRVPEVQVEIKIQVALDAEIKKENRRRRLNNWDECGCKHGHDQHAWCSTEDYDIFALGAILEAF. | 206 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca6g01923 | 205 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 8 | 131 | IPR035892 | - | |
| Seca6g01923 | 205 | Gene3D | C2 domain | 1 | 156 | IPR035892 | - | |
| Seca6g01923 | 205 | PANTHER | OSJNBA0006M15.15 PROTEIN | 1 | 204 | - | - | |
| Seca6g01923 | 205 | Pfam | C2 domain | 13 | 120 | IPR000008 | - | |
| Seca6g01923 | 205 | SMART | C2_3c | 11 | 125 | IPR000008 | - | |
| Seca6g01923 | 205 | ProSiteProfiles | C2 domain profile. | 1 | 128 | IPR000008 | - | |
| Seca6g01923 | 205 | CDD | C2 | 13 | 129 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca6g01923 | Seca-Chr6 | 77184611 | 77185228 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca6g01923 | - | - | ccaj:109803320 | 300.827 |