Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01879 ATGGGGGACCTTCGAAAGCGTGACCTGTTTTTGGGTCTATTCGTTGAGGTAGCAAAAGAGAGAGCCCTACCTGTTGGACCAGAGGAAGGTGGTTTTGGAATGTCATATGATCTTCTGTATGGGAGAGCTGGATTCTTATGGGCTGCACTATTCTTAAACAAGTACTTAGGAGAAGATGCAGTGCCAAAAGATCTTCTTATGCCTATTATTGATGCAGTGTTGGCTGGTGGTAGAGCAGGGGCATCTGATATCAAAGACTGTCCATTGATGTATAGATGGCATGGCACTAGGTACCTTGGTGCAGCAAATGGCCTTGCTGGTATCCTCCATGTTCTGCTTCATTTTCCTCTTCCTAGTGAGGATGCTGAGGATGTCAAGGGAACTTTGAGATATCTGATGAGTAAACGCTTCCCTCATAGTGGAAACTACCCCTCAAGTGAAGGGAATCCAAGGGATAAGTTAGTACAGTGGAGTCATGGTGCCACTGGCATGGCCATCACATTGTCCAAAGCAGCACAGGTTTTTCCAAGTGACAGAGAATTACGAGATGCTGCAATAGAAGCAGGGGAAGTTGTGTGGAAGAGTGGATTGGTGAAGAAGGTGGGACTTGCTGATGGTGTATCTGGAAATGCCTACGCCTTCCTTTCCCTCTTCAGACTAACTGAAGAGAGTATATATGAAGAGAGAGCAAAATCATTCTCCAGTTTCTTATATGATAATGCTAGAGCTTATCTGGCTGCTGAGGGGCAATCACTGAAGGGTGGAAATGATCACTACTCTCTCTTCCATGGACTTGCTGGGACAGCATGCCTCTGGTTTGATCTGCTTGCACCCCACAATTCTAGGTTCCCAGGCTATGAGTTATAG 867 0.4602 MGDLRKRDLFLGLFVEVAKERALPVGPEEGGFGMSYDLLYGRAGFLWAALFLNKYLGEDAVPKDLLMPIIDAVLAGGRAGASDIKDCPLMYRWHGTRYLGAANGLAGILHVLLHFPLPSEDAEDVKGTLRYLMSKRFPHSGNYPSSEGNPRDKLVQWSHGATGMAITLSKAAQVFPSDRELRDAAIEAGEVVWKSGLVKKVGLADGVSGNAYAFLSLFRLTEESIYEERAKSFSSFLYDNARAYLAAEGQSLKGGNDHYSLFHGLAGTACLWFDLLAPHNSRFPGYEL. 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01879 288 Pfam Lanthionine synthetase C-like protein 14 288 IPR007822 GO:0031179
Seca6g01879 288 CDD euk_LANCL 1 284 - -
Seca6g01879 288 Gene3D - 13 288 IPR012341 GO:0005975
Seca6g01879 288 PRINTS Eukaryotic LanC-like protein family signature 172 193 IPR020464 -
Seca6g01879 288 PRINTS Eukaryotic LanC-like protein family signature 134 149 IPR020464 -
Seca6g01879 288 PRINTS Eukaryotic LanC-like protein family signature 274 288 IPR020464 -
Seca6g01879 288 PRINTS Eukaryotic LanC-like protein family signature 66 81 IPR020464 -
Seca6g01879 288 SUPERFAMILY LanC-like 35 288 - -
Seca6g01879 288 PRINTS LanC-like protein superfamily signature 98 114 IPR007822 GO:0031179
Seca6g01879 288 PRINTS LanC-like protein superfamily signature 201 214 IPR007822 GO:0031179
Seca6g01879 288 PRINTS LanC-like protein superfamily signature 258 275 IPR007822 GO:0031179
Seca6g01879 288 PRINTS LanC-like protein superfamily signature 36 51 IPR007822 GO:0031179
Seca6g01879 288 PRINTS LanC-like protein superfamily signature 154 174 IPR007822 GO:0031179
Seca6g01879 288 PANTHER LANC-LIKE PROTEIN 2 288 - -
Seca6g01879 288 SMART LANC_like_2 5 288 IPR007822 GO:0031179
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01879 Seca-Chr6 76569995 76575501 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01879 - - gmx:100785406 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01879 6 76569995 76575501 Seca6g01879 6 76569995 76575501 ECH