Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01859 ATGAGGAAACTGAAAGAAGTGATTATAGGCATAATCAAGGACAAAGCTTCACAGAGCAAAGCTGCAATCCTTTCCAAACGCACCACTCTCTCTCTTTTACGCGCCACCACTCACGATTCTTTCACCCCTCCCACACACAAACACCTCTCCACGCTTCTTTCCTCTGGCGATGGCTCACGCGCCACCGCTTCCACCGCGGTGGAGCTTCTCATGGACCGCTTACAAACGACCCAGAACTCCGCCGTTGCACTCAAGTGCCTAATCGCCGTCCATCACATCATCAAACACGGCACCTTCATCCTCCGTGACCAACTCTCCGTTTTCCCTTACACCGGCGGCAGAAACTACCTTAACCTCTCCAACTTCCGAGACAAGACAACCCCTGTTTCATGGGAACTCTCTTTCTGGGTCCGATGGTACGCTCAACACATAGAAAACCTCCTCTGTACTTCTAGAACCCTCGGGTTCTATATCGGAGCCACAACGCAGATGGTTCCAGAAACAAAGGAAGAAAGGGTTTCAGGTCTTACGAACAGTGACCTATTGAGAGAGATTGATTCTTTGTTGGTTCTGGTTGAGGGAATTGGGAAAATACCCAATTCTGCATATTCCAATGAAGGGAACAACAACAATAAGCTAGTGGTTGAGATTGTGGGTTTGGTGGAAGAGGATTGGGTTGCGGCGTTGAGTGAGGTATGGGTCAGGGTCAACGAGTTCAGGGAGAGGGAGAGATTGGGTTGTCTCAGTTTTGGAGAAAGGGTGGAATTGGTTTATGCTCTGAATAGATTAGAGGAGTGCAGAGAGAGGATTATTGTGGAGGTAGCTTGGGAGAGGAAATTTTGGGATTTGGTGGGAGAATTGAAGGAGAAGATTGGGAAGATGGAGGTGTGTAGGGAAGATGAGAAGGTGTGGAAGAAAGTGACAGGGCAGAGGGAAACAGAGTCAGATAGGTTTGCTGGGAGGGTTCTCAATTCTGTTGATTTCATCAGGTTTCCTTCTGCAAGGTTCTTGTAG 1014 0.4842 MRKLKEVIIGIIKDKASQSKAAILSKRTTLSLLRATTHDSFTPPTHKHLSTLLSSGDGSRATASTAVELLMDRLQTTQNSAVALKCLIAVHHIIKHGTFILRDQLSVFPYTGGRNYLNLSNFRDKTTPVSWELSFWVRWYAQHIENLLCTSRTLGFYIGATTQMVPETKEERVSGLTNSDLLREIDSLLVLVEGIGKIPNSAYSNEGNNNNKLVVEIVGLVEEDWVAALSEVWVRVNEFRERERLGCLSFGERVELVYALNRLEECRERIIVEVAWERKFWDLVGELKEKIGKMEVCREDEKVWKKVTGQRETESDRFAGRVLNSVDFIRFPSARFL. 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01859 337 Pfam ANTH domain 31 192 IPR011417 GO:0005543
Seca6g01859 337 ProSiteProfiles ENTH domain profile. 20 158 IPR013809 -
Seca6g01859 337 SUPERFAMILY ENTH/VHS domain 30 156 IPR008942 -
Seca6g01859 337 CDD ANTH_N_AP180_plant 30 151 - -
Seca6g01859 337 FunFam Putative clathrin assembly protein At4g40080 3 157 - -
Seca6g01859 337 Gene3D - 6 158 IPR008942 -
Seca6g01859 337 SMART enth_2 26 158 IPR013809 -
Seca6g01859 337 PANTHER CLATHRIN ASSEMBLY PROTEIN 8 231 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01859 Seca-Chr6 75409912 75410925 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01859 - - tpra:123917017 404.445