Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01846 ATGGGGATCATCACTCGCAGTTCTACTGGTAGAAAACCAAGTGAAATTATGAGACTTTTTGTGACAACTTTTATTGGAGTAGTTTTTGGCTTCTTTATAGGAGTATCGTTTCCAACATTGTCATTAACCAAGCTAAATCTGCCATCTGGTCTGCTTCCCTCCATTGATCTCTCTTACATTGAAGACAGATATACAGGTCGTCATGCTTGGTCTTTGATGAACAATAGTAAGAGAAGTTTATCACCACATCACTTATCAAATGATACATCAAAGGTACACATTGTATCCTGTCATCATTATTATGGACATTTTAAGTTCCTGAGTTTACAAGGATCAAGGATTTGGGTTCCATCAAATCCAAAAGGTGCAGAAAGATTACCTCCTGGCATTGTTGAAGCTGAGTCAGATCTTTATTTGAGGAGATTGTGGGGTAACCCCAATGAGGATTTAACATCCAAGCCAAAGTACCTTGTAACTTTCACCGTTGGCTATGCTCAGAAAAATAATATTGATGCAGCTGTGAAAAAGTTTTCCGGGAACTTCACAATCCTACTATTTCATTATGATGGCCGAACAACTGAATGGGATGAATTTGAATGGTCAAAGAAGGCTATTCATGTGAGTGCTCACAAACAGACCAAATGGTGGTATGCCAAGCGGTTTCTGCATCCTGACATTGTGGCACCATATGACTATATATTTATATGGGATGAAGACCTAGGTGTTGAGCATTTTAATGCAGAAGAGTACATAAAATTGGTGAGGAAGCATGGCTTGGAGATTTCACAACCTGGTTTGGAACCTAATAAAGGGTTGACATGGCAAATGACAAAAAGAAGAGGTGATCGTGAAGTTCACAAAGTGACTGAGGAGAAAGCAGGATGGTGTTCTGACCCCCATTTACCTCCTTGTGCAGCGTTTGTCGAGATTATGGCTCCAGTGTTCTCGCGTGATGCTTGGCGCTGTGTGTGGCATATGATTCAGAATGATTTGGTCCATGGCTGGGGTCTTGATTTTGCTATTAGAAGATGTGTTGAGCCTGCACATGAGAAGATTGGAGTTGTTGATTCTCAATGGATTGTTCACCAAGGTCTTCCTTCACTAGGGAATCAGGGTGAATCACAAACTGGGAAAGCGCCATGGATGGGGGTGAGGGAGAGGTGTAAAAAGGAATGGACCATGTTCCAGAGTCGTTTAGCAGGTGCAGAAAACGCGTATTTCAAGTCCATGAGAAATGATATGTCTAATTCCTCTGCTCATTAG 1263 0.4141 MGIITRSSTGRKPSEIMRLFVTTFIGVVFGFFIGVSFPTLSLTKLNLPSGLLPSIDLSYIEDRYTGRHAWSLMNNSKRSLSPHHLSNDTSKVHIVSCHHYYGHFKFLSLQGSRIWVPSNPKGAERLPPGIVEAESDLYLRRLWGNPNEDLTSKPKYLVTFTVGYAQKNNIDAAVKKFSGNFTILLFHYDGRTTEWDEFEWSKKAIHVSAHKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQMTKRRGDREVHKVTEEKAGWCSDPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFAIRRCVEPAHEKIGVVDSQWIVHQGLPSLGNQGESQTGKAPWMGVRERCKKEWTMFQSRLAGAENAYFKSMRNDMSNSSAH. 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01846 420 PANTHER OS06G0731900 PROTEIN 12 418 IPR007877 -
Seca6g01846 420 Pfam Protein of unknown function (DUF707) 118 404 IPR007877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01846 Seca-Chr6 75204671 75210771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01846 - - gmx:100811265 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01846 6 75204671 75210771 Seca6g01846 6 75204671 75210771 ECH
Seca12g06093 12 152796405 152808377 Seca6g01846 6 75204671 75210771 PCT