Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01836 ATGGCGGAGACGGTAAGACTTCGCTTGTTGTTCGAGGATCGTCGCATGTTGAGCAAATCTAAGAAGAAGGAAGGGTTGAAGCGTTGCTGGTTTCTCCTTAAACCCCAACTCAGCACCATTTCCGATCTTACCTCTCATCTCCATAACGCTTTCCGTCTCCACCGCACTTGTCCTCATGGCATCACCCTCTCGATGGATGGTTTTGTTTTACCGTCTTTTGAGTCTACTTGTATTTTGAAGGATAAAGACATTGTCTGTGTGAAAAGAAAGGGAGGCATATCAACTGATGATAAACCTGCAACGCTGCCATCTGCAAACCGTGGGAATCGATGTATAGAGCTTCCGAAACTTCTTGCAATTGAGGGGATTCAAGAGGAGAGTGGAGGACATGAATCTGCATCCGAAGAGGATAACATTGACCAATTTGGAGGTGCAGTTTGTGTGGAACCTAAATCGGATGGGGGGAGTGCAATCTCGAAGAAAAGAAAAGCATCAAAGAAGCTCAAGAGCCCTAGTAAGAAGAAGATTAAAATGTCTACTACTGAAAACGCGGCAGTCACTCCTGAGGTCCATGAAGAGGAAAATGGAAGCTTTCAAGACCATATTCATAACCAATCGAGTCTTGCCAAGAAGAATAATGACAAGTCATCCAATTTATCTAGTCAGCCAAATAAATCTAACAACCTTGATTTCAATAATCAGAAAAATGACAGAAGTGGGCAGATGAGCGATGAAACAAGGTTCCTTCAGCCTCAAGATGAAGGTGAAACTAAAAAGATGCCTAGCAGAAGTGCTCGACGGAAGAAAGCTAAGAGAAAATGGTTGAGAGAACTAAAATTAGCAAAGGAGAAGCTCCATCTGAGTCCAATGCATGAAAAAGATGAACAGCAATCGCCTATCAAAGATAATAATTGCATAGTTTCTGATGTAAATCAACAATCTAATGAAGAAAGTGAAGCAGACGATGACTTTGTTCCTGTGGAAATTAGGCCAGGGCACATTCGGTTTCAGCCCCTTAAAAAAGATCAGGCAGTGCCACAGAATCAGTTGCCAGTGGAAACATTTCAGTGGAATGGTATTACCAGCAAGAAGAAGGGCCAGAAATGGGGTAAAGAGAGGATCTCATCCCGTAAACAGGATGACTATGAACATTCCAGTCAAGAGTGTCCTACTGTTCAGGATGCTGAAAAAAAGCACACAATCAATGCAGTAGATTTTGAAAAGCTTACACCTTATTCAGGCTTGCCTAAGGAAGGTGATGTAATTGCATATCGATTGATTGAATTATCGTCATCTTGGACTCCTGAGCTCTCCTCTTTCAGAGTACTTATCAAGTCTGCTTTGGATTATATATTAAACCAAAATCATTGCATCAGAAGTTTAATATGTACTACATCCATGTCCGTGCAGGTTGGGAAAATATCACAGTATGATGCTAAATCAAACAGGATTTGGCTGGAGCCAGTTTTAGAATTTCCCTTTGATTTTGAGAAAAAAATAGATGAGAATGCATCATCTGTACAGTCTGATCCACCCCTTTATCGGGAAGATGGTTCTTTAGAGATAGATTATGCGTCCCTTGCTGATATTCGAAAGGTTAAGCATGGCCCCTCTAATTTGGCAACTGTAGTTGCTTCTAGTGATGCTTGGGTCAATCCAACAAAAGCAACTAACAGTAGCACTGATGAAAAACTTCCGGGTGATCAAACTGCTGTGGGAAGTTGCAAGCCAGAAAGGGAAGGTCATATCCCTGCTAAAGAAAATGGGAAAGTAAACGTGTGGGATGAAATTAACGAGGCATTAGAAGCAAAGAAGGCTAAGCTGTCGCAGGAGGATGGCTGGAGTAAAGCAGAGAGTTCAGGCACGCGGTCATGGTCCTATAGAGCCTTGAGATGCAGTGCGCTGGGTCCCACAATGGCACTTTTAAGGTCGCAGAATGGAATGTAG 1947 0.4248 MAETVRLRLLFEDRRMLSKSKKKEGLKRCWFLLKPQLSTISDLTSHLHNAFRLHRTCPHGITLSMDGFVLPSFESTCILKDKDIVCVKRKGGISTDDKPATLPSANRGNRCIELPKLLAIEGIQEESGGHESASEEDNIDQFGGAVCVEPKSDGGSAISKKRKASKKLKSPSKKKIKMSTTENAAVTPEVHEEENGSFQDHIHNQSSLAKKNNDKSSNLSSQPNKSNNLDFNNQKNDRSGQMSDETRFLQPQDEGETKKMPSRSARRKKAKRKWLRELKLAKEKLHLSPMHEKDEQQSPIKDNNCIVSDVNQQSNEESEADDDFVPVEIRPGHIRFQPLKKDQAVPQNQLPVETFQWNGITSKKKGQKWGKERISSRKQDDYEHSSQECPTVQDAEKKHTINAVDFEKLTPYSGLPKEGDVIAYRLIELSSSWTPELSSFRVLIKSALDYILNQNHCIRSLICTTSMSVQVGKISQYDAKSNRIWLEPVLEFPFDFEKKIDENASSVQSDPPLYREDGSLEIDYASLADIRKVKHGPSNLATVVASSDAWVNPTKATNSSTDEKLPGDQTAVGSCKPEREGHIPAKENGKVNVWDEINEALEAKKAKLSQEDGWSKAESSGTRSWSYRALRCSALGPTMALLRSQNGM. 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01836 648 PANTHER COILIN P80 1 647 IPR024822 -
Seca6g01836 648 MobiDBLite consensus disorder prediction 150 273 - -
Seca6g01836 648 MobiDBLite consensus disorder prediction 366 393 - -
Seca6g01836 648 MobiDBLite consensus disorder prediction 200 248 - -
Seca6g01836 648 Coils Coil 591 611 - -
Seca6g01836 648 Pfam Coilin N-terminus 5 237 IPR031722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01836 Seca-Chr6 74987353 74994149 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01836 K13150 - gmx:100776892 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01836 6 74987353 74994149 Seca6g01836 6 74987353 74994149 ECH