Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01823 ATGTGTGATGCTGATTGGGGAGCAGATCCTGATGATAGGCGTTCAACTTCAGGATCTTGCATATATCTTGGCCCTAACTTGGTTTCTTGGTGGTCTAAGAAGCAACCCCTTGTTGCAAGGTCAAGCACTGAAGCAGAATATCATAGTCTTGCTACCACTACTGCAGAAGTTTTGTGGATTCAAACTCTTCTTACTGAGTTACATGTGCCTTTTTCTACTCCTATTATCTACTGTGATAATCTCAGCGCAGTGAGCCTGTCACATAATCCTGTTCTCCATAACAGAACTAAGCATATGGAGTTAGATCTGTTTTTTGTGCGTGAAAAGGATGAAATTAGAAATAAGATTTCGGCATTGGAGACAGTTCTGGTAAATGAAAGTCAGAACTCTACTTCTTCCCTTCTTCGAGTTGAGAAATATAAAGAAACAAGGCAGGAATTGGATAAAAAGTTTGACACTCAATATCAGCGCCGCATTGCAGAAGCACTTGATAATCATTTGACAGCTGTTCAACGGGACCGTGAACTTAGATCACAAATAGAAGAAAGGAAAATAAGAAATGATGCAGTGTATGAAGAGGCCAAGAGAAAGATTGCTTTGCAAGAGGAAAAGCAACTGCAAGAAAAGGCCAAAGCTGAAGCAGAGGCCAAACTTAGAGCTGAGGAAGCAAAACGAGCTGCATTGGAAGCTGAGAGAAAAGAAGCACTAGAAGCCAAAAGAAAGGCAGCAATGGAAGCTGTAAAAAGAGCAGCAGCAGAAGCTGAAAGAAGAGCAGAAAAGGAAGCCATTACTTCTGGAGTAACCAAACCTGAAGCTGCTGAGCGTCCAACAGATCATGCATCAAGCCTGTCAAATGCTGAAACCAAGGAATGTGATACTTTATATAGAGCTGCAACAAGTGCTTTAAATCTAGAGCATGGGAGGCTACAGAAACTGAAAGAGCTATGTGAGAGGAACCAAGTGATAAGATCGAGCTCTAATAAGGATTATACGCGCCATGAGAATCATATTTCCCGTCTTATAAGGCAAATAAGGGGCATAAGAGACAGTGTTAGGTCAAAAGCAAGTGATCTCATTAAACTTTTGAATGATCCTCTATGTCCTCAGTCAATCAGCATTGAGATATTTGCTAAAAAGGTTGTTTCATACTGCGAAAACCCTGGTAATTCTCCCTTCGCAAATGCCTACGTCATTGTTCTTGTTACATCTCAGGTCCCACATGCAATGGATATTTTGCTAGCTGAGCTTCACAGGGCCTGCCCATACACCGTCCCAAAGCACATGGTTTACAGAAAGTCGACCTTTCAATCAAAAGAGGCATACTTCAGAAGTATTGGTTATCGAGAAAATGATGAAAAGATGGAGAGTACAGAAGATTTTCTAAAGCGGTTAGAATCCTATGTGAAGGTGTATGGTGCACTAGTTCAGACTGAAATTCCAAACGTTCCAAATTTGCATGGCTTGCAAGAAGGTTGGGCATGGCTTGCAAGGTTCTTGAATGCTCTCCCAGCCAATCAATATACAGCTGTTTCGCTCAATGCATTCTTGCAAGTGGCTGGATTTGCTCTCTTTAAAAGATACAAATCTCAATTCTTAAAGATGCTGAATGTCATCTCAGAGAACTTTTTAGTTGATCTGAAATCAAAGAATGTACCAGAAATGAATACAACTATTGTGATGATAGAGAGTTATATAAAAGATAGGACGTTCCTTCGAGAGCCAGAAGGAAGGAGCCTGCAGTCTGATTTGGCATCGAGCATATTTGCTTAA 1770 0.409 MCDADWGADPDDRRSTSGSCIYLGPNLVSWWSKKQPLVARSSTEAEYHSLATTTAEVLWIQTLLTELHVPFSTPIIYCDNLSAVSLSHNPVLHNRTKHMELDLFFVREKDEIRNKISALETVLVNESQNSTSSLLRVEKYKETRQELDKKFDTQYQRRIAEALDNHLTAVQRDRELRSQIEERKIRNDAVYEEAKRKIALQEEKQLQEKAKAEAEAKLRAEEAKRAALEAERKEALEAKRKAAMEAVKRAAAEAERRAEKEAITSGVTKPEAAERPTDHASSLSNAETKECDTLYRAATSALNLEHGRLQKLKELCERNQVIRSSSNKDYTRHENHISRLIRQIRGIRDSVRSKASDLIKLLNDPLCPQSISIEIFAKKVVSYCENPGNSPFANAYVIVLVTSQVPHAMDILLAELHRACPYTVPKHMVYRKSTFQSKEAYFRSIGYRENDEKMESTEDFLKRLESYVKVYGALVQTEIPNVPNLHGLQEGWAWLARFLNALPANQYTAVSLNAFLQVAGFALFKRYKSQFLKMLNVISENFLVDLKSKNVPEMNTTIVMIESYIKDRTFLREPEGRSLQSDLASSIFA. 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01823 589 Pfam GLE1-like protein 315 538 IPR012476 GO:0005643|GO:0016973
Seca6g01823 589 Coils Coil 109 129 - -
Seca6g01823 589 MobiDBLite consensus disorder prediction 252 287 - -
Seca6g01823 589 Coils Coil 191 264 - -
Seca6g01823 589 PANTHER GLE-1-RELATED 108 582 IPR012476 GO:0005643|GO:0016973
Seca6g01823 589 CDD RNase_HI_RT_Ty1 2 109 - -
Seca6g01823 589 Gene3D - 296 572 IPR038506 -
Seca6g01823 589 SUPERFAMILY DNA/RNA polymerases 15 104 IPR043502 -
Seca6g01823 589 FunFam Protein GLE1 299 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01823 Seca-Chr6 74781847 74789849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01823 3 117 Receptor kinase-like Gene Family AT4G23160 43.966 1.95e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01823 K18723 - gmx:100802744 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01823 6 74781847 74789849 Seca6g01823 6 74781847 74789849 ECH