Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01819 ATGAATTTCCTTAAAAACCAGTCGATTTCTTTGTTCTCAATGCAAGATGATATTCTTATAAAGAAGCTCCTCCTCACACATGATCCAGATGGTCGTAGGCTGGATTCTGAGGCAATGCTTCATGCTGTTGGCAACATTATGTTTCATGCTTCCACAATAGTAGTGGCTTCTAATATATATTCTGCTTCCTTTCAGAAGAATGATGTGACTGAAATTGAAACACTTGGTTGTTGTGAACCAGTAGGATGCATCATCTCAAAAATATGCAAGATTCTCTGCAAATGCTGTGGTGAAGGTGATATTAACTCAAGGATAATGAGTTTGTTTGATTTGATAGGAAAGTATAGCTGGGATGCAAAAGCAGTTTTAGTGCTTGCTGCTTTTGCTGCAAGATATGGTGAATTCTGTCAATTTATACAGCTATATCCTGCTAATACTTTGGCGGCTTTAATTTGGAGATTTAAGCAGATGCCCTGCAACTTAAGGTCATTGAAGCCCCAAATTAAGGCACTGAGCTTGTTGGTTAAGACCATGATGGATGTGGCTATGTGTATCATTAAGTTTGAATCACTTCCCCTTCAACATGTAGAGCTTGGCAATGACATATACCTTGTTACAAAGTCTCTTGTATATGAAGCTGTGTACTGGATTACCAGAAGCAGTTTGGCATGTTTTTCTCAAGTCATGGATTTCACTTCCAAGAAACATGAGCAACTCTCAAGTTTGGCGTATAGGTTAAGTGACTTATGCAGCATTCTCAGAGGACAGGTGGATGTGTGTCACCGAGAAATAGAGAGAAACTTGCATGATAGGCTGTTGAATCTTGTTCACGAGGAGCACATCGATAATCAGAAGGTTCTCAATTTACTTTTTCCTTCAAAGAATTACTTGCCATTGAAGCATTGCTCAACACAAGTAAAGCTTGGTGTGTCTGAACTAAACAATAAGGTAGTTCTGTTGTTGATCTCAAATCCACAGCTACTCACCATGGAACAATTATTCTTACTAGTTCACCAAACATGTGATCATCCTTTTAATGAGAGGTTGAAGGACAGTTATAAGATTGTGTGGGTTCCCCTTCCATCTTCTGATACATGGACTGATGCTGAAGAGAGTAGTTTTAATTTTCTATCAGATTTCTTGCCTTGGTATGCTATTCAGAAACCAAGGTTACTTAGCCCAGCAGTGGTGAAGTATATCAGGGAACAATGGAACTACAAGGATGATCCCATCATGGTAACACTGGATTCCAATGGGAAGGTCACAAATTTCAATGCTCTTGATATGATTAAGATTTGGGGAGCCCAAGCTTATCCCTTTTCAGCTTCAAAAGAGGCAGAGCTCTGGGAAAACCAGAACTTGACAATGCAACTTTTGCTGGTTGATATCAATCCTCTCCTTGCTTACTGGGTTGAACAAGGCAAAAATATTTGTCTTTATGGGAGTGAAAACATGGCTTGGATCCAACAATTCAATGATAACATAACTGAGCTCAAAGGAGCAGGTTTGCAGCTGGAAACAATATATGTTGGTAACAGTCGGTTAGGTGAACATGTTAAAAGGATAATGGCAAGAACTGATGAAATAAATCTCAGTGATCCACTTTCCTTTACCAAAGTGCAATTCTTTTGGCTTCGGTTGGAGAGTATGAGAAGGTCTAAACTCAGAATAGGGAAGACACCAAGTTGTGATCATGTCCTAGCAGAGTTGTCAGCTTTGCTTGACGTGGATGATAAAGAGGAAGGTTGGGCAGTGATTGGAAGTGGGAGTTCAACTGATACTTTTATGCTTCAAGGGGTGCAGGTGATGGAATTCTTAAGGAACTATCCTTTGTGGGGAGACAAGATAGACAAGTTGGGATTGTCAGGTGCCCCAAGAAACTTCTTAGACCCTACTTCTCTTGCAGGACCTTGCAATCACTCTTACATAGTTCCCTCAAGTGAAAGTGAAGGACTAATTCAAGGAACTATAATTTGTCAAGTGTGCAAGCGTCCTATGAAGAAGTTTGTGGTGTACCAGCCATGA 2025 0.4005 MNFLKNQSISLFSMQDDILIKKLLLTHDPDGRRLDSEAMLHAVGNIMFHASTIVVASNIYSASFQKNDVTEIETLGCCEPVGCIISKICKILCKCCGEGDINSRIMSLFDLIGKYSWDAKAVLVLAAFAARYGEFCQFIQLYPANTLAALIWRFKQMPCNLRSLKPQIKALSLLVKTMMDVAMCIIKFESLPLQHVELGNDIYLVTKSLVYEAVYWITRSSLACFSQVMDFTSKKHEQLSSLAYRLSDLCSILRGQVDVCHREIERNLHDRLLNLVHEEHIDNQKVLNLLFPSKNYLPLKHCSTQVKLGVSELNNKVVLLLISNPQLLTMEQLFLLVHQTCDHPFNERLKDSYKIVWVPLPSSDTWTDAEESSFNFLSDFLPWYAIQKPRLLSPAVVKYIREQWNYKDDPIMVTLDSNGKVTNFNALDMIKIWGAQAYPFSASKEAELWENQNLTMQLLLVDINPLLAYWVEQGKNICLYGSENMAWIQQFNDNITELKGAGLQLETIYVGNSRLGEHVKRIMARTDEINLSDPLSFTKVQFFWLRLESMRRSKLRIGKTPSCDHVLAELSALLDVDDKEEGWAVIGSGSSTDTFMLQGVQVMEFLRNYPLWGDKIDKLGLSGAPRNFLDPTSLAGPCNHSYIVPSSESEGLIQGTIICQVCKRPMKKFVVYQP. 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01819 674 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 7 673 IPR039299 GO:0010088
Seca6g01819 674 Pfam Sieve element occlusion C-terminus 443 673 IPR027944 -
Seca6g01819 674 Pfam Sieve element occlusion N-terminus 15 279 IPR027942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01819 Seca-Chr6 74647561 74650646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01819 - - gmx:100819823 999.579