Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01810 ATGGGTTCTCACGGCGCACCGGCGGCGGAGGCGCTTATAGCATCGGGCCGGAGCTCCGAGAAGCTCAGCCTCCCAGCTCTTCAATCCAAAATGAAGTGTGACCCAGAAGGCTACGAATCAGAGCTACTCCTTCTCCTCAACCAATTCAATTCCTCTTTGGAACTCTTTCAGCAACAAGCCAAAATGAACTTCACCTCCATAACCGGCATTGGCACCGACCCCACCGTCGCTAAAGACCTCGGCGACAGGGCCATGTTCCTCGCCCACGTCACTCCCTTCTACCCCAACCACCTCGCCGATTTCCCTCTTAAACTCGCCGATTTGCTTCGCTCCGCCGCGCGCACGCTACCTTCCGGGCTTCGCTGCCACCTCACGCAGGCCCTCATCCTCCTCGTCAACCGAAAGTTTGTCGATGTTGGAGAAACGTTGTCGTTGTTCATGGAGCTTCAAACTCTAGGTGACAGAACGCTGAAAAAATTGGCGTTTGATCACGTTATTCATAGCATAAGGCGCATGAACCAAAAGCATAAAAACGAAGCCAAGAACCGTGCGCTTCAGAATGTCCTGTTTACCATGCTACAGCAAAAGGATGAAGAGCGAGCTAAGAGGGCGCTTGTGACTCTTTGTGAGCTTCACAGGAGAAAAGTGTGGTTTGATGAGAGAACAGCAAATGCAATTTGCACTGCTTCCTTCCATCCAGCATCGAGGATCATGATAGCAGCTTTGTCATTTCTGCTTGATTATGAGAAGCTTTTAGACAATGAAGATAGTGATGATTCCAGTAGCGATGATGAATTGACCGAATCACCTCAAGTTATCCTCAGTAAGGAGACAGTTTATAAGGCAAGCCATCAAGGTACATCAGCTAGCAAAAAGAAAAAGAAAGCAAAACTGCAACGTGTCATACGTAGCATGAAAAGGCAACAACGCCAGTCATCTGAACGGAGCAATAACAATTACTATTCACCACTTAACCACCTGAAAGATGCTCAGGGTTTTGCTGAGAAGCTGTTCTCACGTCTACAGAAATGTAATGAACGATTTGAGGTTAAAATGATGATGTTGAAATTGATTGCTCGAACGGTTGGACTTCACCGGTTAATTTTGTTGAACTTTTATTCTTTTCTTCAGAAATATATTCAGCCTCATCAACGTGATGTCACAAATTTGCTTGCAGCAGTGGTTCAGGCTTGCCATGATATGGTTCCTCCTGATGCAGTTGAGCCCCTGTTCAAACAAATAGTAAATCAATTTGTACATGACCGTTCACGTCCAGAGGCTATCACTGTTGGACTAAATGCAGTCAGGGAGATTTGCATGCGCATGCCTTTGCTAATGAATGAAGACTTACTACAAGACCTTGCCCTATATAAGAAGTCACATGAGAAGGCAGTTTCAGTTGCAGCTCGATCTCTAATTGCATTATTCAGAGAGATTTGCCCTTCACTGCTAGTTAAGAAGGACCGTGGGCGGCCTGTTGACCCTAAGGCAAGACCAAAGGCCTTTGGAGAAGTCAACGTTGCTACTGACGTTCCTGGTGCCGAGTTGCTGCAGATTGTTGATGATTCTGATGAGGGGGAGAGTGGTGATTCTGATGATCCTGTATCAAGTGGCTCTGATGATGACCAGGAAAATGATCAGATGAGTATATATGATGATGATGAGAACCAGCTATGCACTGATGATACTGGAAGTGATGATGATGAAGCTGAAGATGATGATCTTGTATTAGAAGACGAAGATGAGAAAAGTTCTGATTATGAAACTGGTGTTAGTGAGGCTGATGATGATGATGTTGAGGATAAGGAGGATGACCTTGAAGACAGTGACCAGGCTGATGAAGAGGATGAAGTTTCAGAACATGAAGAAGATAATGATCTGCATACTTTTAGTGATGATGGAAGTGTGGAGACAAAAAGTGCATTGAAAGAGACTGCAAAAAAAAGGAAATTTACTGATTTTAATGGTCAACTTCTAGCTGCTGATACAAGTCTCCGGGCTTTGAAGAAATTGGCAGGAACAAAGGTGGGGCACGCCCTACCAGAATCTAAAGATGGAATTCTTTCTAATGAGGACTTCCAGAGGATCAAGGAACTAAAGGCAAAAAAAGAAGCAAGAATTGCATTGGCCCAGCATGGACTAGCAAAATCAGCAGCAATTAAGGTTCCAAGCTCGGATCAACTAAGTTTAAAGCGAGTGGATGGTACTATGCTTGAAGTTCATGTAAGGAAAAAGATGAGCAAGGATGAAAGATTGGCATTAGTTAAAGCAGGGAGGGAGGAAAGAGGAAAATACTATGCTCGAACAGCAGTAAAACAGAAAAAGACGGGTGGCCTAAGCAACCGACAGAAGGAACACAAGAAGAAAATGCCACTGGCTGCAAAGAGAGACAAGGTAGCAAGATCTCGAACAGAGAAAAAGAAAAAACAACAGCGGTCCGGCAAACAGTTCCGTGGGAGGAAAGCGTGGAAACAATGA 2478 0.4487 MGSHGAPAAEALIASGRSSEKLSLPALQSKMKCDPEGYESELLLLLNQFNSSLELFQQQAKMNFTSITGIGTDPTVAKDLGDRAMFLAHVTPFYPNHLADFPLKLADLLRSAARTLPSGLRCHLTQALILLVNRKFVDVGETLSLFMELQTLGDRTLKKLAFDHVIHSIRRMNQKHKNEAKNRALQNVLFTMLQQKDEERAKRALVTLCELHRRKVWFDERTANAICTASFHPASRIMIAALSFLLDYEKLLDNEDSDDSSSDDELTESPQVILSKETVYKASHQGTSASKKKKKAKLQRVIRSMKRQQRQSSERSNNNYYSPLNHLKDAQGFAEKLFSRLQKCNERFEVKMMMLKLIARTVGLHRLILLNFYSFLQKYIQPHQRDVTNLLAAVVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGLNAVREICMRMPLLMNEDLLQDLALYKKSHEKAVSVAARSLIALFREICPSLLVKKDRGRPVDPKARPKAFGEVNVATDVPGAELLQIVDDSDEGESGDSDDPVSSGSDDDQENDQMSIYDDDENQLCTDDTGSDDDEAEDDDLVLEDEDEKSSDYETGVSEADDDDVEDKEDDLEDSDQADEEDEVSEHEEDNDLHTFSDDGSVETKSALKETAKKRKFTDFNGQLLAADTSLRALKKLAGTKVGHALPESKDGILSNEDFQRIKELKAKKEARIALAQHGLAKSAAIKVPSSDQLSLKRVDGTMLEVHVRKKMSKDERLALVKAGREERGKYYARTAVKQKKTGGLSNRQKEHKKKMPLAAKRDKVARSRTEKKKKQQRSGKQFRGRKAWKQ. 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01810 825 MobiDBLite consensus disorder prediction 281 321 - -
Seca6g01810 825 PANTHER HSDA/SDA1-RELATED 19 821 IPR027312 GO:0000055|GO:0042273
Seca6g01810 825 MobiDBLite consensus disorder prediction 623 641 - -
Seca6g01810 825 Pfam NUC130/3NT domain 86 137 IPR012977 -
Seca6g01810 825 MobiDBLite consensus disorder prediction 778 800 - -
Seca6g01810 825 MobiDBLite consensus disorder prediction 287 304 - -
Seca6g01810 825 SUPERFAMILY ARM repeat 84 495 IPR016024 -
Seca6g01810 825 Coils Coil 291 311 - -
Seca6g01810 825 MobiDBLite consensus disorder prediction 522 641 - -
Seca6g01810 825 Coils Coil 792 812 - -
Seca6g01810 825 MobiDBLite consensus disorder prediction 770 825 - -
Seca6g01810 825 MobiDBLite consensus disorder prediction 522 622 - -
Seca6g01810 825 Pfam SDA1 446 821 IPR007949 -
Seca6g01810 825 MobiDBLite consensus disorder prediction 801 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01810 Seca-Chr6 74415392 74421657 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01810 K14856 - gmx:100816774 1236.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01810 6 74415392 74421657 Seca6g01810 6 74415392 74421657 ECH