Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01788 ATGGGTCAGGCTCTTGGCATACCTGATAGTGGGGTATTAGCACAAACTGAACCAATTTCAAGGATAGATCCTAATGAACCATTGGATAAACTTCTCTTGAACAAGAGATTCAGGCAGTCTTTTATGGCATTTGCTGATAGTTGCTTGGCTGGGGAGAGTGTGCACTTCTTTGATGAAGTTCATGAGCTCAGTAAAATACCTGAAGATGACTGTGTTAGAAGGATCTACATGGCTCGGCATATTATTGAGAAGTACATAGTTCCAGGAGCGGCTATGGAGTTTTCATCTAAATCACACATATATATTGCACTTCCCCAGAACTTGGCAAAAGATTACTGGTCATCAATGTTCTTCCTGAAGTTCCGGGATGAATCCAATATGAGATCTAATAATGGCCATGAGCTGGAGCAAATGACAGGGTGGAATTATTCTCCAAGGTTGAGTTCTGTGCATGGTTCAGATGATCCTTTTCACCAGGAGCATCCTCTCAAGAGCTCAGGCTGTGGCAATGATACTAACTCATAA 525 0.421 MGQALGIPDSGVLAQTEPISRIDPNEPLDKLLLNKRFRQSFMAFADSCLAGESVHFFDEVHELSKIPEDDCVRRIYMARHIIEKYIVPGAAMEFSSKSHIYIALPQNLAKDYWSSMFFLKFRDESNMRSNNGHELEQMTGWNYSPRLSSVHGSDDPFHQEHPLKSSGCGNDTNS. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01788 174 Pfam Regulator of G protein signaling domain 28 110 IPR016137 -
Seca6g01788 174 PANTHER REGULATOR OF G PROTEIN SIGNALING 20 108 - -
Seca6g01788 174 Gene3D - 15 128 IPR044926 -
Seca6g01788 174 SUPERFAMILY Regulator of G-protein signaling, RGS 4 124 IPR036305 -
Seca6g01788 174 MobiDBLite consensus disorder prediction 150 174 - -
Seca6g01788 174 ProSiteProfiles RGS domain profile. 27 90 IPR016137 -
Seca6g01788 174 SMART RGS_3 27 122 IPR016137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01788 Seca-Chr6 73921688 73923226 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01788 - - vun:114195118 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01788 6 73921688 73923226 Seca6g01788 6 73921688 73923226 ECH