Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01785 ATGTCTGAGAATCACGTAACAGAGCAGCTTTCGGAAGCGGATTCGGATCCGGGTCCTCATACGGGGCACGACCCTGCAACCGAATCAAACACTGATACTTATCAAGATCAGGTGGAGCATGTTGATCTCAAAGGTGGAGTTTTGGGAGAAGCTGCAGATGGAAAGTCTGCAGAGGATACTGCCAAAGATGACATGTTTGTTGATTGCCCTGATGAGCTAACCACGTTTGATGGTAGGCAAAAGGAAGAGGAAGGTGCAGCTATAGAAAATGAAGGTGACATTGACAAGTCAGAGGAAAATCAAGTTATGCATCAACAACAGAGTCATTTTGTTGAGTTGAGCAATGGGGAAGGAGATGGTTACCCCACAGGGGAGCTGGAACAGCTGCGTCTTTCGCTGGAGAAAGCTGTTGCTGAGAAAGAAAGTATTGTGAAGGAATACCAGGAAGAAAAAGAAACTGTTTCCCAAGGAGTGTTTGATCTTCATTATCGGCTAAAGACTCTCACTTGTAAACAACAGTCATTGCCAAATGAGGATGAAGTTGGAGTTAGGGAAGTTACTGATGTTCCACTGAGGGAGATGGTAAAAGAATGTTTGGAGTTTGTGAAAACCGCTTCAGAGGAACGACCAAAGAGTGAAGCCACTATAAGTAATCTTCACGAACTTATATCTGTGAAGGACCGTGAGATAGAGGATCTTAATGCAAAGGTTGCCCAGTTAACGGTATCTAATAAGAGTTTGCAAGTTTCTTCAGAAGCTCAACTTGAAAAGGATCGACATCTTGATATTGTAATAGATAAGATGATATCCTCTCTTGCAACAGTTGTTAATCAAGAGCAAGTATTGGATAATTCTATAAGTGGGAAAATAGTTTATATTGAGGAAGGCACCACACTTTTAATTGAAAAGTATAATCAGATTCTTTCTGATATTTATCAACTTGGGCAGTCTTTCTCTGAGGTTGGCTTGGATGCTAGAGAGCAGGAATATGGGAACATACTTGTTGATGCTCGTGGAGGGTTAATGGAGCTCAAAAGAAAGGAAGCAGAATTGGTTCAAAAACTGTCTCATTTAGAAGATGAAAATCGGAAACTGGTTGAAGAGCTTGACAAGGAAAGGGTGATGATAGGGACATTAAATACTGAGCTTGGAAATGTGAAAACAGAACTTGAGCAGGAAAAGGTTAGGTGCGCTAATACCAGAGAAAAGCTTAGTATGGCTGTGACAAAAGGAAAGGCATTGGTACAGCAGCGAGATTCACTAAAGATTTCTATGGCTGATAAATCCAGCGAGCTCGAGAAATGTTTAATTGAATTGCAGGAGAAGTCAGCTGCACTAGAAGCTGCTGAACTTACTAAAGAGGAGTTGGCCCGAAGTGAAAATATGGTTGCATCCCTGCAGAATTCATTACTACAAAATAATACAATTTTTGAACAAGTGGAAGAAATATTGTCTCATGCTAACCCTGATCAATCTGAAATGCTTGATATGCCAGATAGACTACAATGGCTTGTGGATGACAGAAATACACTTAAGGGTGCCTTCCTGGAGTTATGCAAATTGAAGGAAGCTCTATCTCTAGTGGACCTACCAGAACCTGTTTCATCGTCTGATTTAGAATCACAAATGAACTGGCTTACAGATTCTTTTCATAAGGCCCGGGATGATATGTATATTCTGCAGCAAGAAATTTCTACAATCAAGGAAGCATCCATGAACTATATTGATCGCTTGAGCATTTCACTTTTGCTGGAATTACAGGAAAAAGATTACCTTCAGTTAGAATTAACTGATTTACGGTTCAAATATGAAGAGCTTGTTGACAAGAACCATCAGATTTCTTCGGAGAAGGATCAGATAGTGAGAATGTTAGTTGATCTTTCTGGTCTAAACATGGAAGATGAAAGAATTGATCAATTCTCTTCCAACACTTCAATGATCATTGATTTATGCTTTCAAAATATAAAAGGACAGAGTGATCTCCACTCTGGAGCATCTCATATTGATCCTGAGTTGTTTGAAAGGATTCAAAATCTCTTGTATGTTAGGGATCAGGGATTAATGCTCTATGAGGATATACTGGAAGAAGAGATGCAAATTAGATCAGATGTTAATAAGCTGTCAAATGAGTTGAAAGTGGCATCTGAGGAAATTACAGCACTGAAAGAAGAAAGGAGTTCTCTGGTTAATGATCTTGAACGATCAGAGGAGAAGACTGCCATGCTTAGGGACAAGTTGTCCATGGCAGTTAAGAAAGGAAAGGGATTAGTTCAAGATAGGGACAATCTAAAAAGTCTTATAAATGAAAAGAACTCAGAGATTGAGCAGTTGAAGGTTGATTTGCAGAAGCTAGAATCTGCAGTTTCTAAATACAGGGATGAGATCAATAGATTGTCCAACGATGTGGAAAGCATCCCAAAGCTGGAGGCTGATCTTCTGGAAATGAAAGGGGAAAGGAATCAGTTTGAACAATTTTTGATGGAGAGCAATACCATGTTACAAAGAGTGATGGAGTCCATTGATAATATTGTTCTTCCAGTTGACCCAGTTTTTGGTGAACCTATAGAAAAGGTGAAGTGGCTTGCTGGTTATGTCAGTGAATGCCAAGATGCTAAGGTACACGTAGAGCAAAAGTTGCAGCTAGTAAAGGATGAGGCCAGTATACTTGAAATTAAATTAGCAGAAGCCCAAGCTACTATAAACTCCCTGGAACAGAGATTATCTTCTTCTGAGGATAGTGTTTCTCAACTTGCTGAAGAAAAGACAGAATTAGAAGATGGGAAAGAAAAGGTTGAGGAAGAGTTACGGAAAGTTAAAGAAAAATTTGCTGAAATTTGTAGTACTAATAAGTCACTTGAAGATGCCTTGTCACAGGCAGAAAAAAATATTTCTGTTCTTTCCGAAGAGAAAGAGCAGGCTCAAGTAGGTAGAGTTGCTGCAGAGACAGAGTTAGAGAGAGTTAAAGATGAAGCAGCCAGGCAGGCAAGCGAACTAGCAGAGGCCAGCAGCACCATAAAGAATCTAGAAGATGAACTGTCACAGGTTGAGAGTAAGGTCAATTTATTGACTGAAAAATATAATGCTGATCAAGTTGTCAAGACTGATGTGGAAAATGAATTGAAAAAGATGCAAGATGAAGCTGCAAATAATGCCAGCAAATTGGTAGGTGCCTCTGCAACTATAAAATCCCTGGAAGATTCACTGTTGAAGGCGCAAGATCATATTTCTGCCCTAGAAGATGCAAATAAAATTGCTAAACAGGAGATATCTTTGCTTGGTTCAAAGTTAAATTCATGTATGGATGAGTTAGCTGGAAAGAATGGCAGCTTAGAAAACAAGTCCCTAGAGCTCATTGGACTCCTCAATGATCTTCAGGTGCTTATGAAGGACAATACTCTATTTCCCAGGATAAAACAATGCTTTGAGAGGAAATGTGAGACCCTGAAGAATATGGACGCCACTCTGAACAAAATAAGAGCCCATGTTGCCATGACTGCTAAGGATTCTGAAGGACACCATATGATTGAGGAAGATCCATTTGTGAGAAAATCATTCTTGGATGGCCTTGATAAGTCTGAAATTGAATTGGACAACAGAGAGATTAATGGCACTGATATTGACACCATAATCTCATCGTCTGGAAAGATCCTTAAAGGATTCCAGTCGAGGAACAAACACATTTCAGATAAGTTTGATGAATTTTCTGATTCTATTGATGAGTGCATTTCACCTCTCCATGAAAAACTATTGGAAACAGAGACCAAGATAATGACTATTGTTGAGCAAATGGAAATTATGAAAGAAAAAGCAAATAACATGGCGAAGTTGAAAGAAGAAAAGGAAAATGTTATTGCCACTTTAGAGAGCGATATCAGTGTGTTGCTGTCTGCATGCGCTGATTCTACCAGTGGGCTTCAGAATGAAGTTGACAAGAATCTTGGACAACTAGGCTCCATTTCTGAGGTTGAAAAGATAAATCATGAAGCAGATGCACAAGCAGAGCATCACAAAAACAGCAAATATGCAGAGGCTTCACAAAAGTTGATAAATGCTTCTAGAAAAGCTCAAGCTTTGATTAGACAGTTTGAATTTAAAAGTGAGCAGTTAGCTGCAACAATTGGAGATTTTCAGAATAAATTGAAAGAAACAACAATTGCTTTTGAGTTGGCCACAGACGAGAGAGACTTAAATAAAAACAGAGTTTTGCAGCTGGAGTCTGATATTCAATATCTCCAAAATGGTTACAGTGAATTTAAGGATAAGTTAGAGGGTTATCATGTCCTAGAAGAAAAATTAAAGGAAAATGAAGCAAAGATTTCATCAATGCACAGTGCTCTGTTGGCAAAAGAAGAAGAAAGCTCCCTACTTTCAGCATCTCAGGTGAGAGATCTCTTTGACAAGATCGATAGGGTCAAAATCCCTATTGTAGAGTCTGAAGAAGATGATATGGACCTGCACACTTCAGACCCTGTGAAGAAGCTCTTTTACATTATTGATAGCGTCTCTAGGTTGCATCATCAAATAAACTCTCTGTCTCATGATAAAAATGAGATGCAATCAATCCTCGAAACTAAGGTTCTTGAAATTAAGGATCTGAAGGAGGAAGTCAAACAACTCAATAGAAACTGCGAAGACTCAAAAATAGTCAAGAATGAATTGTCTGAGCTTACCATTGCTTTAGAAAAACTTATAGATATTTTGGTAGCCAATGATTGGGTTGTAGATAGAAAATCGAAAGGTGTGAAGGAATTAATACCAGCATTGGAAAAGCATATCATTGCCATCCTTTCAGAATCTGAAAATTCAAAATCCAAAGCTCAGGAACTTGGTATTAAGTTCATTGGAAGTCAGAAAGTTATTGATGAATTAACGACCAAGATTAAATTACTTGAAGATTCACTTAAAGATAAGGTTTCTCAGCCAGATGTTGTCCAGGAAAGGAGCATATTTGAAGCACCCTCATTGCCTGCTGGGTCTGAGATAACTGAAGTTGAAGAGGGATCACTTGGCAAGAAAGCAATACCTCCTGTCCCATCAGCTGCTCATGTGCGAAATATGCGAAAAGGATCAACTGACCATCTTGCACTTGATATTGATGTGGAGTCTGATCATTTAATTAAAAGTGCAGATACTGATGACGACAAAGGTCACATGTTCAAGTCTCTGAACACTTCTGGATTTGTACCAAAACAAGGAAAGCTCATTGCAGACCGTATTGATGGAATCTGGTAA 5232 0.3895 MSENHVTEQLSEADSDPGPHTGHDPATESNTDTYQDQVEHVDLKGGVLGEAADGKSAEDTAKDDMFVDCPDELTTFDGRQKEEEGAAIENEGDIDKSEENQVMHQQQSHFVELSNGEGDGYPTGELEQLRLSLEKAVAEKESIVKEYQEEKETVSQGVFDLHYRLKTLTCKQQSLPNEDEVGVREVTDVPLREMVKECLEFVKTASEERPKSEATISNLHELISVKDREIEDLNAKVAQLTVSNKSLQVSSEAQLEKDRHLDIVIDKMISSLATVVNQEQVLDNSISGKIVYIEEGTTLLIEKYNQILSDIYQLGQSFSEVGLDAREQEYGNILVDARGGLMELKRKEAELVQKLSHLEDENRKLVEELDKERVMIGTLNTELGNVKTELEQEKVRCANTREKLSMAVTKGKALVQQRDSLKISMADKSSELEKCLIELQEKSAALEAAELTKEELARSENMVASLQNSLLQNNTIFEQVEEILSHANPDQSEMLDMPDRLQWLVDDRNTLKGAFLELCKLKEALSLVDLPEPVSSSDLESQMNWLTDSFHKARDDMYILQQEISTIKEASMNYIDRLSISLLLELQEKDYLQLELTDLRFKYEELVDKNHQISSEKDQIVRMLVDLSGLNMEDERIDQFSSNTSMIIDLCFQNIKGQSDLHSGASHIDPELFERIQNLLYVRDQGLMLYEDILEEEMQIRSDVNKLSNELKVASEEITALKEERSSLVNDLERSEEKTAMLRDKLSMAVKKGKGLVQDRDNLKSLINEKNSEIEQLKVDLQKLESAVSKYRDEINRLSNDVESIPKLEADLLEMKGERNQFEQFLMESNTMLQRVMESIDNIVLPVDPVFGEPIEKVKWLAGYVSECQDAKVHVEQKLQLVKDEASILEIKLAEAQATINSLEQRLSSSEDSVSQLAEEKTELEDGKEKVEEELRKVKEKFAEICSTNKSLEDALSQAEKNISVLSEEKEQAQVGRVAAETELERVKDEAARQASELAEASSTIKNLEDELSQVESKVNLLTEKYNADQVVKTDVENELKKMQDEAANNASKLVGASATIKSLEDSLLKAQDHISALEDANKIAKQEISLLGSKLNSCMDELAGKNGSLENKSLELIGLLNDLQVLMKDNTLFPRIKQCFERKCETLKNMDATLNKIRAHVAMTAKDSEGHHMIEEDPFVRKSFLDGLDKSEIELDNREINGTDIDTIISSSGKILKGFQSRNKHISDKFDEFSDSIDECISPLHEKLLETETKIMTIVEQMEIMKEKANNMAKLKEEKENVIATLESDISVLLSACADSTSGLQNEVDKNLGQLGSISEVEKINHEADAQAEHHKNSKYAEASQKLINASRKAQALIRQFEFKSEQLAATIGDFQNKLKETTIAFELATDERDLNKNRVLQLESDIQYLQNGYSEFKDKLEGYHVLEEKLKENEAKISSMHSALLAKEEESSLLSASQVRDLFDKIDRVKIPIVESEEDDMDLHTSDPVKKLFYIIDSVSRLHHQINSLSHDKNEMQSILETKVLEIKDLKEEVKQLNRNCEDSKIVKNELSELTIALEKLIDILVANDWVVDRKSKGVKELIPALEKHIIAILSESENSKSKAQELGIKFIGSQKVIDELTTKIKLLEDSLKDKVSQPDVVQERSIFEAPSLPAGSEITEVEEGSLGKKAIPPVPSAAHVRNMRKGSTDHLALDIDVESDHLIKSADTDDDKGHMFKSLNTSGFVPKQGKLIADRIDGIW. 1744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01785 1743 Coils Coil 1515 1556 - -
Seca6g01785 1743 MobiDBLite consensus disorder prediction 55 97 - -
Seca6g01785 1743 Coils Coil 1061 1088 - -
Seca6g01785 1743 SUPERFAMILY Tropomyosin 865 1080 - -
Seca6g01785 1743 Coils Coil 1620 1640 - -
Seca6g01785 1743 Coils Coil 1259 1290 - -
Seca6g01785 1743 Coils Coil 341 375 - -
Seca6g01785 1743 Coils Coil 1341 1361 - -
Seca6g01785 1743 Coils Coil 690 738 - -
Seca6g01785 1743 PANTHER CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED 310 1714 - -
Seca6g01785 1743 MobiDBLite consensus disorder prediction 1 97 - -
Seca6g01785 1743 Coils Coil 126 153 - -
Seca6g01785 1743 Coils Coil 879 1025 - -
Seca6g01785 1743 Coils Coil 760 801 - -
Seca6g01785 1743 Coils Coil 1033 1053 - -
Seca6g01785 1743 Coils Coil 432 469 - -
Seca6g01785 1743 Coils Coil 216 250 - -
Seca6g01785 1743 Gene3D - 996 1170 - -
Seca6g01785 1743 Gene3D - 689 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01785 Seca-Chr6 73883577 73891548 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01785 - - gmx:100800411 2523.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01785 6 73883577 73891548 Seca6g01785 6 73883577 73891548 ECH