Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01778 ATGGGTGAATCTTCAACTTGTCTTGTGAGGTCCTTCTCCACTCCCTCTGACACTATTTGCGGAGCCCAAGAGGGTAACCCTTTGCGTGCCCTTGGAGAATCTATCTCTTTTGGGAGGTTTATGTCAGAAAACTTGGATTGGGAAAAATGGTCAGCATTCTCATCACACAAGCGCTATGTAGAAGAAGCTGAGAAATATTCCAAGCCAGGTTCTGTTGCTGCAAAAAAAGCCTACTTTGAGGCTCATTACAAGAAAAAGGCTGCAGAGAAAGCAGCTGCATTGATCCAAGAAGAAAATGCTCAAGCTAATGGAACTTTCGATTCAGAAACTCAGGAAGGAAACTGCACTCACTCATCCATTGAGACTTCCAATGAACAGCTGGATAAAGATGGTGTTATTTACCAAGTTGTTGATTGTGCTGAGACAAACCAACATAAATGTGATGTTGGACAAAGTGATTTAGACATTTCCAATGTGGAAGGAGCAGAGGATGTCCCACATCCTCATGTTGATACAAATATTAATGTAGAAAGTTGCACACATGTTGATAATTCTAATCATCTTGATCATGTCACAGTCCATGAGAATGTCGTCAACCCCGTAGAAGAGAGGATGCCTGATCATGGCACTGCTGGTCAGGAAATTTTGGCTTTGCCTGTCAAGGGAAGAGAAGTAAATTCTTCTCCAAAATTATCAACCAAAACTAAGGATGTGAGACTTTCTCATTCTCTTGATAAAAGGAAGGGTGCTGCTTCTGTACCACCCAGAAATGGAATAAACAATGGTTTGAAAGGCAACAAGTCTGTGGGAGATACAGTTGAGAAGAAGAGACTAAGTGCACGGTCACTACACATGTCAATCAATCTTCCTTCTGGCACTGGTGAAACTAGCAAAACAGCTGCTGCAGCTGTACCACCCAGAAATGGAATAAACAGATTCTCAACAAGTAAGAAGTCCGTTGGAGGCTCAGTTGAGAAGAAGAGAATAACTGCACCATCACTTCATATGTCAATCAATCTTCCATCTGGCACTAGCGTGGCAAGCAAAACAACTACTGCTGTTGTTAAACCCAGAAACAGAATGGACTTTGCTTCAAAAATTATGAAGTCTGTCGGGGATTCAGTGAAGACATCAACTGCAAGGTCACTCCACATGTCAATCAATCTCCCTTCTGGTGCAGGTGAAACAAGTAAAACAGCTTCAGTGTTTGAAAATAACAGAACCAAAAAAATACATAGTAATTTGCCCAAAGATCAACCTGTGGCATCACGGATATCAGCCAAGGCATCTCATGATTTGTTAAAGCAAGCTTCGGCAAATCCCCCTTCTCAGGGTAGAAGGACTGAAAGGCTACTTAATAAGTCTGTATCTGGAGGTGTTACAGTAAATGCAAAACTTTCCTCTCTTTCTGTCGACGGCCTGAAATCTTCAAGCACCACCAAAAGCAATCTCCGATCCTCTACCATATCATCGCCTTTTAGATTCAAAAGTGAAGAAAGAGCAATAAAACGCAAAGAGTTCTTGCAAAGGATGGATGAAACTAAATCCAAGGAAGAAGAGAAAGTTCAGCTTCAAAGGATACCCAAGGAAAGAGCAGGGCAGATTATGCTATGA 1614 0.4176 MGESSTCLVRSFSTPSDTICGAQEGNPLRALGESISFGRFMSENLDWEKWSAFSSHKRYVEEAEKYSKPGSVAAKKAYFEAHYKKKAAEKAAALIQEENAQANGTFDSETQEGNCTHSSIETSNEQLDKDGVIYQVVDCAETNQHKCDVGQSDLDISNVEGAEDVPHPHVDTNINVESCTHVDNSNHLDHVTVHENVVNPVEERMPDHGTAGQEILALPVKGREVNSSPKLSTKTKDVRLSHSLDKRKGAASVPPRNGINNGLKGNKSVGDTVEKKRLSARSLHMSINLPSGTGETSKTAAAAVPPRNGINRFSTSKKSVGGSVEKKRITAPSLHMSINLPSGTSVASKTTTAVVKPRNRMDFASKIMKSVGDSVKTSTARSLHMSINLPSGAGETSKTASVFENNRTKKIHSNLPKDQPVASRISAKASHDLLKQASANPPSQGRRTERLLNKSVSGGVTVNAKLSSLSVDGLKSSSTTKSNLRSSTISSPFRFKSEERAIKRKEFLQRMDETKSKEEEKVQLQRIPKERAGQIML. 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01778 537 Coils Coil 85 105 - -
Seca6g01778 537 MobiDBLite consensus disorder prediction 241 272 - -
Seca6g01778 537 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 320 532 IPR044216 -
Seca6g01778 537 MobiDBLite consensus disorder prediction 435 455 - -
Seca6g01778 537 MobiDBLite consensus disorder prediction 287 325 - -
Seca6g01778 537 MobiDBLite consensus disorder prediction 436 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01778 Seca-Chr6 73710052 73716997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01778 - - gmx:100799349 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01778 6 73710052 73716997 Seca6g01778 6 73710052 73716997 ECH