Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01777 ATGGCACAAGCTTTATCCTCTAACCTGGGTCTCAACCTTCCAATACTTTCCAAGAGTTCATCGACTCCCAAAGGACCAACCCATTTCCCCAAGTTGCTGAAATTGAAGCCTGTAAGGGCCATGGCAGGGGAATCAAGAGAAAACCTTGACCATGTGCCTAGACACAACAAGCACCCCTCCCAGCCCAAAAACAGAGTTGCCCCTGCCGCACCCACAGGGTTGTGGGACCGATTTCCTACAGCAAGGACAGTGCAAGAGATGATGGAGACGATGGAGAGGATGATGGAGGACCCTTTTGCATTGAGCACACTTGAGTGGCCTTCATCTCCCTTGCCAACTGAGGGAGTGGGTGGGTATAGAAGGAGGGGAAGGACACCTTGGGAGATTAAAGAAGGAGAAGGTGAATACAAGATGAGGTTTGATATGCCTGGGATGAGTAAGGAGGATGTGAAGGTATGGGTGGAAGAGAAGATGCTGGTGGTGAAAGCTGAGAAGGCACCAAAGAAGAAGAAAGGGATGGTGGAACAAAAAGAAAATAATGAAGAAGATGATGAAGAAGATTGGTCTGCTAAGAGTTATGGTAGGTATAGTAGTAGGATTGCTTTGCCAGAAAATGTGCAATTAGAGAATATTAAAGCAGAGGTTAGGGATGGTGTTCTCTACATAACCTTTCCTAAGGCTACCAGCTACTCAAACATACTGGATATCCAAGTTCAATGA 720 0.4653 MAQALSSNLGLNLPILSKSSSTPKGPTHFPKLLKLKPVRAMAGESRENLDHVPRHNKHPSQPKNRVAPAAPTGLWDRFPTARTVQEMMETMERMMEDPFALSTLEWPSSPLPTEGVGGYRRRGRTPWEIKEGEGEYKMRFDMPGMSKEDVKVWVEEKMLVVKAEKAPKKKKGMVEQKENNEEDDEEDWSAKSYGRYSSRIALPENVQLENIKAEVRDGVLYITFPKATSYSNILDIQVQ. 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01777 239 CDD ACD_sHsps-like 128 226 - -
Seca6g01777 239 Gene3D - 74 238 IPR008978 -
Seca6g01777 239 MobiDBLite consensus disorder prediction 168 189 - -
Seca6g01777 239 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 118 239 IPR002068 -
Seca6g01777 239 Pfam Hsp20/alpha crystallin family 128 238 IPR002068 -
Seca6g01777 239 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 239 IPR044587 GO:0009408
Seca6g01777 239 SUPERFAMILY HSP20-like chaperones 112 229 IPR008978 -
Seca6g01777 239 MobiDBLite consensus disorder prediction 45 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01777 Seca-Chr6 73704040 73704930 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01777 K13993 - gmx:100811966 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01777 6 73704040 73704930 Seca6g01777 6 73704040 73704930 ECH